Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 Y_RNA.192-201ENST00000363977 102 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 SNORA5.1-201ENST00000384275 131 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 MIR105-2-201ENST00000385083 81 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 RNU1-149P-201ENST00000390870 161 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 OR4K12P-201ENST00000406538 961 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC079809.1-201ENST00000415468 276 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 RPL7P44-201ENST00000424827 742 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 LYPLA1P1-201ENST00000434514 622 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC241584.1-201ENST00000438469 1241 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC016772.1-201ENST00000444170 1261 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 FAR2P1-206ENST00000449736 709 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 ANKRD26P4-201ENST00000455755 950 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AL133477.1-201ENST00000457472 514 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 MTCYBP35-201ENST00000503630 1137 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC109445.1-201ENST00000512356 383 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC008837.2-201ENST00000513076 418 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 HMGN1P9-201ENST00000515212 298 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC010487.1-201ENST00000594408 1172 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AL357094.1-201ENST00000603845 844 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AL451074.6-201ENST00000608512 729 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AL359535.1-201ENST00000612100 1087 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 AC109780.1-201ENST00000451768 1344 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 SAGE2P-201ENST00000420011 2126 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 RNU6-83P-201ENST00000384568 112 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 U3.23-201ENST00000391132 200 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 EI24P3-201ENST00000399046 1062 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 BOLA3P4-201ENST00000418151 400 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 RPP40P1-201ENST00000426762 456 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 USP9YP11-201ENST00000427537 717 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 BRWD1P3-201ENST00000428816 390 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 SKP1P3-201ENST00000429280 487 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 B3GNT2P1-201ENST00000434960 952 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 RPS11P7-201ENST00000442125 465 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 PTMAP3-201ENST00000447474 330 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 DNAJB5P1-201ENST00000454004 806 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 NECAP1P2-201ENST00000455668 727 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 RN7SL515P-201ENST00000463999 297 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC005532.2-201ENST00000467154 373 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 RN7SL222P-201ENST00000476452 299 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 RPS24P16-201ENST00000497294 392 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC008953.1-201ENST00000497334 318 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 WBP1LP4-201ENST00000505043 344 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 MTCO1P30-201ENST00000515244 580 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 SNORD116-26-201ENST00000516006 96 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 MTATP6P15-201ENST00000527233 835 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 EIF5A2P1-201ENST00000564027 460 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AL354943.1-201ENST00000572103 781 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms