Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC024341.1-201ENST00000526444 1552 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 MAPK10-304ENST00000641341 3984 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 METTL21EP-201ENST00000298105 713 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 RNU6-146P-201ENST00000384602 108 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 RNA5SP397-201ENST00000391323 118 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 RPS24P12-201ENST00000402084 394 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 RNU2-17P-201ENST00000410290 190 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 RPL17P35-201ENST00000432217 549 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AL035458.1-201ENST00000433096 585 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 YWHAZP2-201ENST00000440317 728 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 PTMAP3-201ENST00000447474 330 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 RPL23AP23-201ENST00000452590 471 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 NDUFA12P1-201ENST00000455914 406 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 NPM1P17-201ENST00000479221 602 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 RNA5SP446-201ENST00000515955 82 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 HAUS1P3-201ENST00000523909 662 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AP002812.4-201ENST00000532139 286 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC079610.2-201ENST00000604818 690 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC090948.2-201ENST00000607363 564 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC055764.2-201ENST00000610089 670 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 AC100847.1-201ENST00000611316 481 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 HSPD1P14-201ENST00000432666 1618 ntBASIC4.32□□□□□ -1.72
ATG4BQ9Y4P1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC006042.3-201ENST00000454684 1469 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 GTF2H2B-203ENST00000508065 1432 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 SNORA70F-201ENST00000384142 135 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 RPS3AP23-201ENST00000401762 784 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AL512430.2-201ENST00000406786 339 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AL807761.1-201ENST00000417622 171 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC069213.2-201ENST00000420238 366 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 ARL2BPP3-201ENST00000421226 480 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 MTND2P11-201ENST00000423638 648 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 NPM1P24-201ENST00000428039 894 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC073508.1-201ENST00000428866 656 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 RPL21P91-201ENST00000429231 479 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC023141.6-201ENST00000429418 337 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 BX119904.1-201ENST00000432026 348 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 MTND6P18-201ENST00000439477 513 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC092685.1-201ENST00000447960 1243 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC006463.2-201ENST00000473326 348 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 MTND3P24-201ENST00000506306 329 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC010285.3-201ENST00000511668 676 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC093014.1-201ENST00000548926 724 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms