Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RPS27AP18-201ENST00000515536 459 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC011270.1-201ENST00000558606 583 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC022968.1-201ENST00000567372 442 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 SNX18P1Y-201ENST00000616231 511 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC006840.1-201ENST00000623069 542 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC112484.5-201ENST00000624189 228 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 AL773545.4-201ENST00000637262 310 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 AL513478.4-201ENST00000641636 310 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC093909.5-201ENST00000621839 1799 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CISHQ9NSE2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CISHQ9NSE2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CISHQ9NSE2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC104118.1-201ENST00000607625 1589 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CISHQ9NSE2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CISHQ9NSE2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CISHQ9NSE2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CISHQ9NSE2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CISHQ9NSE2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CISHQ9NSE2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CISHQ9NSE2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
CISHQ9NSE2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CISHQ9NSE2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.3□□□□□ -1.72
CISHQ9NSE2 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CISHQ9NSE2 RNU1-13P-201ENST00000384499 162 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 TRIM60P17-201ENST00000415181 719 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.3□□□□□ -1.72
CISHQ9NSE2 AC091390.1-201ENST00000433904 331 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 ELOCP18-201ENST00000434209 337 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 OR4C10P-201ENST00000434991 931 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 ELOCP8-201ENST00000439309 332 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 ELOCP15-201ENST00000442090 332 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 RPS11P1-201ENST00000451072 473 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.3□□□□□ -1.72
CISHQ9NSE2 FABP3P2-201ENST00000453169 399 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 RPL5P32-201ENST00000454085 879 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 IGBP1P5-201ENST00000507524 1000 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 MTCO1P35-201ENST00000515270 228 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 RNA5SP154-201ENST00000516193 111 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 HMGB1P19-201ENST00000517578 577 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.3□□□□□ -1.72
CISHQ9NSE2 SETP1-201ENST00000556014 845 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.3□□□□□ -1.72
CISHQ9NSE2 CASC19-261ENST00000641853 1638 ntBASIC4.3□□□□□ -1.72
CISHQ9NSE2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CISHQ9NSE2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CISHQ9NSE2 HMGB3P19-201ENST00000403971 560 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 CYCSP10-201ENST00000417973 294 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 TBCAP1-201ENST00000436520 327 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 AC069285.2-201ENST00000440210 275 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 RPL7AP28-201ENST00000464513 571 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 RN7SL860P-201ENST00000473738 223 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 AC008126.1-201ENST00000549019 480 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 AC105105.5-201ENST00000622635 1294 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CISHQ9NSE2 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 AC097504.1-201ENST00000515103 2415 ntBASIC4.29□□□□□ -1.72
CISHQ9NSE2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AL606537.1-201ENST00000607258 2011 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CISHQ9NSE2 SPRR2C-201ENST00000290702 219 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 RHOT1P2-201ENST00000366423 333 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 ATP5F1P2-201ENST00000398143 760 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 RPL21P65-201ENST00000406094 466 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 RNU4-6P-201ENST00000410804 122 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 AL358176.3-201ENST00000420757 454 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 OR2X1P-201ENST00000421144 687 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 RPS27AP12-201ENST00000429552 465 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AL132838.2-201ENST00000492041 314 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms