Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC073136.2-201ENST00000417282 849 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AL049745.1-201ENST00000433953 286 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 CASP3P1-201ENST00000446037 609 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC022431.1-201ENST00000450941 438 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC010733.1-201ENST00000451515 401 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AL049829.1-201ENST00000465411 156 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 RPS4XP1-201ENST00000482189 787 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 RWDD4P1-201ENST00000488019 565 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 RPL7P51-201ENST00000490532 749 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 GAPDHP56-201ENST00000506031 988 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC008628.1-201ENST00000508663 265 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC090888.3-201ENST00000558917 509 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 SS18L2P2-201ENST00000583960 235 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC005776.1-201ENST00000603164 290 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AL049844.2-201ENST00000604280 628 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC007423.1-201ENST00000605009 627 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC092574.1-201ENST00000609771 420 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AC093799.2-201ENST00000610062 578 ntBASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VIPAS39Q9H9C1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.46□□□□□ -1.69
VIPAS39Q9H9C1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
VIPAS39Q9H9C1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 RAD1P1-201ENST00000231383 813 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 MIR320B1-201ENST00000390209 79 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 TAF9BP2-201ENST00000400856 499 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AL121776.1-201ENST00000429337 372 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC245047.2-201ENST00000441060 530 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 RPL23AP43-201ENST00000446445 471 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 RPL23AP73-201ENST00000492507 471 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 snoU109.6-201ENST00000516831 118 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 RNA5SP143-201ENST00000516936 115 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AL352979.3-201ENST00000553515 247 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 NPM1P47-201ENST00000560843 856 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC128687.2-201ENST00000609657 566 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC004477.3-201ENST00000614061 590 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 MIR6891-201ENST00000618788 93 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC015908.5-201ENST00000623289 343 ntBASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
VIPAS39Q9H9C1 MAPK10-263ENST00000641052 4307 ntBASIC4.45□□□□□ -1.7
VIPAS39Q9H9C1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.45□□□□□ -1.7
VIPAS39Q9H9C1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VIPAS39Q9H9C1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VIPAS39Q9H9C1 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VIPAS39Q9H9C1 SNORA37-201ENST00000384504 129 ntBASIC4.45□□□□□ -1.7
VIPAS39Q9H9C1 NCSTNP1-201ENST00000406229 144 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms