Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 ENPP7P11-201ENST00000505915 627 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC100784.1-201ENST00000522790 310 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC012339.2-201ENST00000523996 453 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AP000859.1-201ENST00000525536 307 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP88Q99567 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.85□□□□□ -1.47
NUP88Q99567 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC090312.2-201ENST00000582687 378 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP88Q99567 MTND3P19-201ENST00000603825 345 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC024257.5-201ENST00000612739 531 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AP002791.1-201ENST00000623291 381 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.85□□□□□ -1.47
NUP88Q99567 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP88Q99567 ATE1-AS1-202ENST00000636460 506 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 LINC02211-204ENST00000642024 1070 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP88Q99567 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP88Q99567 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 HSPA8P14-201ENST00000552265 1805 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NUP88Q99567 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
NUP88Q99567 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NUP88Q99567 MAPK10-338ENST00000641647 3362 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
NUP88Q99567 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
NUP88Q99567 CASC19-206ENST00000641028 1430 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.84□□□□□ -1.47
NUP88Q99567 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP88Q99567 AC026523.2-201ENST00000625039 7739 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.84□□□□□ -1.47
NUP88Q99567 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
NUP88Q99567 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
NUP88Q99567 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP88Q99567 RNU4-28P-201ENST00000364739 141 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP88Q99567 PEX12P1-201ENST00000400284 1048 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 RPS24P7-201ENST00000416921 246 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 AC004074.1-201ENST00000421810 1063 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 UBE2V1P5-201ENST00000440070 405 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP88Q99567 OR52J1P-201ENST00000450596 932 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 AL354710.1-201ENST00000453641 246 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.84□□□□□ -1.47
NUP88Q99567 AL035404.1-201ENST00000497982 568 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 IGKV2-36-201ENST00000519999 223 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP88Q99567 IGJP1-201ENST00000522682 475 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUP88Q99567 UBTFL10-201ENST00000528532 562 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.84□□□□□ -1.47
NUP88Q99567 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP88Q99567 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP88Q99567 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.84□□□□□ -1.47
NUP88Q99567 AC061975.8-201ENST00000587058 721 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.84□□□□□ -1.47
NUP88Q99567 AC025588.2-201ENST00000604851 466 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 AL392112.1-201ENST00000605115 829 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.84□□□□□ -1.47
NUP88Q99567 AC231759.1-201ENST00000616455 597 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 AC023509.5-201ENST00000617434 807 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 MIR7703-201ENST00000620784 77 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 AC092608.3-201ENST00000625017 386 ntBASIC5.84□□□□□ -1.47
NUP88Q99567 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.84□□□□□ -1.47
NUP88Q99567 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
NUP88Q99567 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
NUP88Q99567 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.84□□□□□ -1.48
NUP88Q99567 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP88Q99567 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NUP88Q99567 AC000367.1-201ENST00000452711 1766 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP88Q99567 AP001284.1-201ENST00000528393 2118 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP88Q99567 AC004817.4-201ENST00000602396 3625 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.83□□□□□ -1.48
NUP88Q99567 NACA3P-201ENST00000359690 648 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 RNVU1-6-201ENST00000364688 164 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 MTCO2P31-201ENST00000402702 684 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 KRR1P1-201ENST00000419430 803 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP88Q99567 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP88Q99567 RPF2P1-201ENST00000424137 906 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 HIGD1AP4-201ENST00000430194 280 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP88Q99567 AC093414.1-201ENST00000434712 514 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms