Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
IFT140Q96RY7 MIR133A2-201ENST00000347538 102 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 RNA5SP97-201ENST00000365006 84 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
IFT140Q96RY7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
IFT140Q96RY7 AL157385.1-201ENST00000446973 268 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.66□□□□□ -1.34
IFT140Q96RY7 QTRT1P1-201ENST00000604344 1078 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
IFT140Q96RY7 AC234782.5-201ENST00000617723 324 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
IFT140Q96RY7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.66□□□□□ -1.34
IFT140Q96RY7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.66□□□□□ -1.34
IFT140Q96RY7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
IFT140Q96RY7 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
IFT140Q96RY7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
IFT140Q96RY7 SNORA3.3-201ENST00000408712 125 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 ATP5A1P2-201ENST00000412323 255 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
IFT140Q96RY7 AC236972.1-201ENST00000433225 199 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.66□□□□□ -1.34
IFT140Q96RY7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.66□□□□□ -1.34
IFT140Q96RY7 SETP14-201ENST00000497538 873 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.66□□□□□ -1.34
IFT140Q96RY7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.66□□□□□ -1.34
IFT140Q96RY7 AC022146.1-201ENST00000595307 847 ntBASIC6.66□□□□□ -1.34
IFT140Q96RY7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
IFT140Q96RY7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
IFT140Q96RY7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.65□□□□□ -1.34
IFT140Q96RY7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
IFT140Q96RY7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
IFT140Q96RY7 UBTFL3-201ENST00000418934 1024 ntBASIC6.65□□□□□ -1.35
IFT140Q96RY7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.65□□□□□ -1.35
IFT140Q96RY7 UBTFL6-201ENST00000477929 1024 ntBASIC6.65□□□□□ -1.35
IFT140Q96RY7 AC090013.1-201ENST00000485147 480 ntBASIC6.65□□□□□ -1.35
IFT140Q96RY7 DEFB109D-201ENST00000529497 240 ntBASIC6.65□□□□□ -1.35
IFT140Q96RY7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC6.65□□□□□ -1.35
IFT140Q96RY7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.65□□□□□ -1.35
IFT140Q96RY7 SNX6P1-201ENST00000601728 1224 ntBASIC6.65□□□□□ -1.35
IFT140Q96RY7 AL137843.1-201ENST00000605078 385 ntBASIC6.65□□□□□ -1.35
IFT140Q96RY7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.65□□□□□ -1.35
IFT140Q96RY7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
IFT140Q96RY7 AL133268.1-201ENST00000405676 1401 ntBASIC6.64□□□□□ -1.35
IFT140Q96RY7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
IFT140Q96RY7 RNA5SP51-201ENST00000364750 119 ntBASIC6.64□□□□□ -1.35
IFT140Q96RY7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.64□□□□□ -1.35
IFT140Q96RY7 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.64□□□□□ -1.35
IFT140Q96RY7 RPL21P23-201ENST00000446654 460 ntBASIC6.64□□□□□ -1.35
IFT140Q96RY7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.64□□□□□ -1.35
IFT140Q96RY7 RPS4XP10-201ENST00000465034 731 ntBASIC6.64□□□□□ -1.35
IFT140Q96RY7 HMGN1P11-201ENST00000508668 303 ntBASIC6.64□□□□□ -1.35
IFT140Q96RY7 RN7SKP83-201ENST00000516512 178 ntBASIC6.64□□□□□ -1.35
IFT140Q96RY7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.64□□□□□ -1.35
IFT140Q96RY7 AC025627.2-201ENST00000576220 160 ntBASIC6.64□□□□□ -1.35
IFT140Q96RY7 CR392039.4-201ENST00000624968 501 ntBASIC6.64□□□□□ -1.35
IFT140Q96RY7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
IFT140Q96RY7 AP001642.1-201ENST00000624727 2117 ntBASIC6.63□□□□□ -1.35
IFT140Q96RY7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
IFT140Q96RY7 RNU6-1279P-201ENST00000383917 103 ntBASIC6.63□□□□□ -1.35
IFT140Q96RY7 MIR490-201ENST00000384865 128 ntBASIC6.63□□□□□ -1.35
IFT140Q96RY7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 AC112206.1-201ENST00000468416 477 ntBASIC6.63□□□□□ -1.35
IFT140Q96RY7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 AC007458.1-201ENST00000542812 373 ntBASIC6.63□□□□□ -1.35
IFT140Q96RY7 AC115621.1-201ENST00000604653 858 ntBASIC6.63□□□□□ -1.35
IFT140Q96RY7 AC026368.1-201ENST00000614934 690 ntBASIC6.63□□□□□ -1.35
IFT140Q96RY7 AC019278.1-201ENST00000623516 479 ntBASIC6.63□□□□□ -1.35
IFT140Q96RY7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
IFT140Q96RY7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
IFT140Q96RY7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
IFT140Q96RY7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
IFT140Q96RY7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
IFT140Q96RY7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
IFT140Q96RY7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 AC093815.1-201ENST00000508637 280 ntBASIC6.62□□□□□ -1.35
IFT140Q96RY7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
IFT140Q96RY7 OR5B10P-201ENST00000532869 642 ntBASIC6.62□□□□□ -1.35
IFT140Q96RY7 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 AC244505.7-201ENST00000599675 272 ntBASIC6.62□□□□□ -1.35
IFT140Q96RY7 IMMP1LP1-201ENST00000605170 488 ntBASIC6.62□□□□□ -1.35
IFT140Q96RY7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 AC243312.2-201ENST00000623340 601 ntBASIC6.62□□□□□ -1.35
IFT140Q96RY7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
IFT140Q96RY7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.62□□□□□ -1.35
IFT140Q96RY7 AP002512.4-202ENST00000641599 4530 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms