Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC019080.5-201ENST00000624891 757 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC092184.1-201ENST00000625042 715 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 FRG1EP-201ENST00000634469 770 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 FRG1DP-201ENST00000635586 771 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AC021755.1-201ENST00000559747 1447 ntBASIC5.96□□□□□ -1.46
SYNE4Q8N205 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE4Q8N205 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE4Q8N205 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE4Q8N205 RNU6-468P-201ENST00000384003 109 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 MIR134-201ENST00000385258 73 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC025750.1-201ENST00000399891 379 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 HMGB3P19-201ENST00000403971 560 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 AL356968.2-201ENST00000412769 1257 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC234781.2-201ENST00000426370 994 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 BMS1P19-201ENST00000433925 393 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 FABP5P3-201ENST00000437960 408 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 AL358794.1-201ENST00000445689 381 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 MTCO3P16-201ENST00000454456 754 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC008379.1-201ENST00000463655 464 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 CYCSP20-201ENST00000473154 315 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE4Q8N205 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 AP001781.1-201ENST00000530977 207 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 SMG1P6-201ENST00000532337 2930 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC040958.1-201ENST00000561102 201 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 OOSP1P2-201ENST00000579644 351 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 MTCO3P22-201ENST00000603219 784 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC104118.1-201ENST00000607625 1589 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC093673.2-201ENST00000609674 331 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC008785.1-201ENST00000624475 456 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE4Q8N205 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNE4Q8N205 AC092451.3-201ENST00000625067 1343 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 ADAM24P-201ENST00000398655 2101 ntBASIC5.95□□□□□ -1.46
SYNE4Q8N205 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE4Q8N205 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE4Q8N205 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE4Q8N205 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE4Q8N205 RNU6-1251P-201ENST00000364502 107 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 RNU6-481P-201ENST00000384194 107 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 MIR659-201ENST00000384963 97 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 RNA5SP397-201ENST00000391323 118 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 SNORA79B-201ENST00000410557 148 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC011276.1-201ENST00000469688 323 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 PPP1R11P1-201ENST00000486095 376 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC093752.1-206ENST00000511823 336 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC090819.1-201ENST00000523800 1111 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC004923.2-201ENST00000529649 369 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms