Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MTND5P19-201ENST00000424872 1794 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 RNU6-1159P-201ENST00000362933 107 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 GCNT1P4-201ENST00000404096 329 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AL035422.1-201ENST00000414193 397 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 FO393419.3-201ENST00000428741 282 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 OR51AB1P-201ENST00000429046 620 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 CBX1P1-201ENST00000440184 427 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 RPS26P30-201ENST00000443431 335 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC097499.1-201ENST00000444277 208 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC007547.1-201ENST00000462177 490 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC128713.1-201ENST00000471495 306 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 PABPC1P1-201ENST00000506347 591 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 SCARNA5-201ENST00000516201 276 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 CYCSP25-201ENST00000525280 316 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AL133399.1-201ENST00000527476 298 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 TRIM51DP-201ENST00000529746 596 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 CKS1BP3-201ENST00000600888 237 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC124916.2-201ENST00000604416 224 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC009318.4-201ENST00000620496 486 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 SEC63P2-201ENST00000503863 1939 ntBASIC6.88□□□□□ -1.31
NPAS3Q8IXF0 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 GAPDHP24-201ENST00000328713 983 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.515-201ENST00000384535 112 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AL161909.1-201ENST00000397390 712 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 RPL26P37-201ENST00000411983 438 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 CYP4F32P-201ENST00000426492 504 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 SRIP2-201ENST00000428470 166 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 NANOGP6-201ENST00000429190 847 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 RPSAP65-201ENST00000429660 595 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 HMGB1P9-201ENST00000429856 646 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 HMGB1P12-201ENST00000438594 598 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC008571.1-201ENST00000467232 300 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 H3F3AP3-201ENST00000497682 407 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC098591.2-201ENST00000510152 315 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC067942.3-201ENST00000512025 362 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 SNORA40.12-201ENST00000516329 111 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 CDC42P3-201ENST00000518493 633 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 MIR3133-201ENST00000583157 78 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 GLYATL1P2-202ENST00000588046 902 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms