Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 NAMPTP2-201ENST00000505629 1115 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 MTATP6P22-201ENST00000507369 598 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 RNA5SP497-201ENST00000516081 97 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 BNIP3P1-201ENST00000547295 580 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC122134.1-202ENST00000569111 1201 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC090510.2-201ENST00000617465 629 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 AC011447.7-201ENST00000624228 1590 ntBASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
NUP54Q7Z3B4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 ZNF33CP-201ENST00000432492 2030 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC015813.6-201ENST00000624409 5808 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 SNORA73.1-201ENST00000363107 205 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 U3.15-201ENST00000365398 212 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AP002784.2-201ENST00000397300 549 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 TMBIM7P-201ENST00000418074 855 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 QRSL1P2-201ENST00000418582 964 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 EIF4A1P1-201ENST00000420241 934 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC093422.3-201ENST00000428506 305 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 ELOCP6-201ENST00000429066 328 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 LYPLA1P1-201ENST00000434514 622 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 RPL7P33-201ENST00000444159 742 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AL691482.1-201ENST00000453255 87 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 ELOCP12-201ENST00000458706 328 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 TPT1P3-201ENST00000492841 512 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 NDUFA5P12-201ENST00000503796 343 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 OR5AK3P-201ENST00000527486 1297 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC008033.2-201ENST00000542626 177 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 PCNPP1-201ENST00000552501 511 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AL049830.4-201ENST00000555149 351 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC012254.4-201ENST00000588843 273 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC099669.2-201ENST00000616549 437 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC078880.5-201ENST00000617845 421 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC019206.1-201ENST00000621938 425 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 ATE1-AS1-202ENST00000636460 506 ntBASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP54Q7Z3B4 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AL133243.3-201ENST00000617415 3004 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 MTND4P9-201ENST00000507819 1346 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 RPL22P22-201ENST00000395439 379 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 HMGB3P19-201ENST00000403971 560 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 HMGB3P31-201ENST00000413333 595 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms