Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC58Q4VC31 AC087385.3-201ENST00000620477 187 ntBASIC3.81□□□□□ -1.8
CCDC58Q4VC31 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC58Q4VC31 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CCDC58Q4VC31 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CCDC58Q4VC31 AC009229.4-201ENST00000623854 1947 ntBASIC3.81□□□□□ -1.8
CCDC58Q4VC31 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CCDC58Q4VC31 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CCDC58Q4VC31 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC58Q4VC31 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC58Q4VC31 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 RNA5SP507-201ENST00000363603 121 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 RNA5SP435-201ENST00000364044 108 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 SNORA51.8-201ENST00000384234 132 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC079355.1-201ENST00000421770 223 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 ELOCP10-201ENST00000440624 327 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC053481.1-201ENST00000467217 306 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC104164.2-201ENST00000496953 495 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC147055.3-201ENST00000510547 851 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 SNORD116-26-201ENST00000516006 96 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 OR5D15P-201ENST00000531671 942 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AL109766.1-201ENST00000555080 552 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC091042.1-201ENST00000579213 173 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 BMS1P7-201ENST00000602440 1052 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 ELOCP34-201ENST00000604436 327 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AC005084.1-201ENST00000605160 304 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AL133243.1-201ENST00000614487 366 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 AL021997.2-201ENST00000615674 271 ntBASIC3.8□□□□□ -1.8
CCDC58Q4VC31 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC58Q4VC31 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 MIR659-201ENST00000384963 97 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 MIR298-201ENST00000401212 88 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 MIR1179-201ENST00000408703 91 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 RPL23AP27-201ENST00000415161 451 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 MTND2P2-201ENST00000434633 945 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AL162151.2-201ENST00000448875 158 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 RPL23AP62-201ENST00000463396 453 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 RPL35AP15-201ENST00000468042 339 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AC008953.1-201ENST00000497334 318 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 RNU6-1231P-201ENST00000517185 103 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AC069366.1-201ENST00000583159 838 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 AL031320.1-201ENST00000604177 357 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
CCDC58Q4VC31 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC58Q4VC31 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC58Q4VC31 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC58Q4VC31 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC58Q4VC31 AC009313.2-201ENST00000417893 1941 ntBASIC3.78□□□□□ -1.8
CCDC58Q4VC31 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC58Q4VC31 RNA5SP175-201ENST00000364275 119 ntBASIC3.78□□□□□ -1.8
CCDC58Q4VC31 U3.15-201ENST00000365398 212 ntBASIC3.78□□□□□ -1.8
CCDC58Q4VC31 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC58Q4VC31 USP12PY-201ENST00000427677 1064 ntBASIC3.78□□□□□ -1.8
CCDC58Q4VC31 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC58Q4VC31 HMGB3P21-201ENST00000452483 547 ntBASIC3.78□□□□□ -1.8
CCDC58Q4VC31 CEACAMP4-201ENST00000457676 421 ntBASIC3.78□□□□□ -1.8
CCDC58Q4VC31 RPL7P22-201ENST00000466005 733 ntBASIC3.78□□□□□ -1.8
CCDC58Q4VC31 AC069499.1-201ENST00000489433 509 ntBASIC3.78□□□□□ -1.8
CCDC58Q4VC31 TRAV31-201ENST00000502780 342 ntBASIC3.78□□□□□ -1.8
CCDC58Q4VC31 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms