Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC084824.1-201ENST00000550917 1005 ntBASIC3.73□□□□□ -1.81
UBA52P62987 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.73□□□□□ -1.81
UBA52P62987 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.73□□□□□ -1.81
UBA52P62987 AC105129.1-201ENST00000560250 297 ntBASIC3.73□□□□□ -1.81
UBA52P62987 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.73□□□□□ -1.81
UBA52P62987 AC110741.2-201ENST00000605278 268 ntBASIC3.73□□□□□ -1.81
UBA52P62987 AC073137.1-201ENST00000605636 634 ntBASIC3.73□□□□□ -1.81
UBA52P62987 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.73□□□□□ -1.81
UBA52P62987 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
UBA52P62987 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.73□□□□□ -1.81
UBA52P62987 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.73□□□□□ -1.81
UBA52P62987 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.73□□□□□ -1.81
UBA52P62987 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
UBA52P62987 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
UBA52P62987 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
UBA52P62987 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.73□□□□□ -1.81
UBA52P62987 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.72□□□□□ -1.81
UBA52P62987 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
UBA52P62987 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
UBA52P62987 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBA52P62987 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.72□□□□□ -1.81
UBA52P62987 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBA52P62987 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.72□□□□□ -1.81
UBA52P62987 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBA52P62987 AL138878.1-201ENST00000405131 347 ntBASIC3.72□□□□□ -1.81
UBA52P62987 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.72□□□□□ -1.81
UBA52P62987 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.72□□□□□ -1.81
UBA52P62987 CYP4F29P-201ENST00000420685 446 ntBASIC3.72□□□□□ -1.81
UBA52P62987 GLUD1P9-201ENST00000420997 1173 ntBASIC3.72□□□□□ -1.81
UBA52P62987 AL356387.2-201ENST00000422272 243 ntBASIC3.72□□□□□ -1.81
UBA52P62987 PPIAP17-201ENST00000438507 471 ntBASIC3.72□□□□□ -1.81
UBA52P62987 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.72□□□□□ -1.81
UBA52P62987 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.72□□□□□ -1.81
UBA52P62987 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.72□□□□□ -1.81
UBA52P62987 VN1R32P-201ENST00000452234 905 ntBASIC3.72□□□□□ -1.81
UBA52P62987 RPL7P32-201ENST00000457119 744 ntBASIC3.72□□□□□ -1.81
UBA52P62987 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.72□□□□□ -1.81
UBA52P62987 AC091153.1-201ENST00000466297 402 ntBASIC3.72□□□□□ -1.81
UBA52P62987 RN7SL303P-201ENST00000469773 251 ntBASIC3.72□□□□□ -1.81
UBA52P62987 RN7SL585P-201ENST00000470538 280 ntBASIC3.72□□□□□ -1.81
UBA52P62987 AC104763.1-201ENST00000475274 360 ntBASIC3.72□□□□□ -1.81
UBA52P62987 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.72□□□□□ -1.81
UBA52P62987 PHBP17-201ENST00000528576 541 ntBASIC3.72□□□□□ -1.81
UBA52P62987 HMGB3P26-201ENST00000560051 582 ntBASIC3.72□□□□□ -1.81
UBA52P62987 AC011477.5-201ENST00000586571 259 ntBASIC3.72□□□□□ -1.81
UBA52P62987 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.72□□□□□ -1.81
UBA52P62987 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
UBA52P62987 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.72□□□□□ -1.81
UBA52P62987 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
UBA52P62987 MFSD8-242ENST00000641690 4199 ntBASIC3.71□□□□□ -1.81
UBA52P62987 ZNF962P-201ENST00000443465 3140 ntBASIC3.71□□□□□ -1.82
UBA52P62987 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBA52P62987 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UBA52P62987 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.71□□□□□ -1.82
UBA52P62987 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
UBA52P62987 SNORA70C-201ENST00000384538 135 ntBASIC3.71□□□□□ -1.82
UBA52P62987 HSPD1P16-201ENST00000402302 394 ntBASIC3.71□□□□□ -1.82
UBA52P62987 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UBA52P62987 RPL7AP25-201ENST00000423357 805 ntBASIC3.71□□□□□ -1.82
UBA52P62987 AC011998.1-201ENST00000433403 117 ntBASIC3.71□□□□□ -1.82
UBA52P62987 YWHAZP2-201ENST00000440317 728 ntBASIC3.71□□□□□ -1.82
UBA52P62987 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.71□□□□□ -1.82
UBA52P62987 AC090142.1-201ENST00000465776 462 ntBASIC3.71□□□□□ -1.82
UBA52P62987 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.71□□□□□ -1.82
UBA52P62987 RPL21P126-201ENST00000470049 478 ntBASIC3.71□□□□□ -1.82
UBA52P62987 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.71□□□□□ -1.82
UBA52P62987 AC025554.1-201ENST00000505641 188 ntBASIC3.71□□□□□ -1.82
UBA52P62987 SLC25A15P5-201ENST00000508033 253 ntBASIC3.71□□□□□ -1.82
UBA52P62987 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBA52P62987 MIR2116-201ENST00000517221 80 ntBASIC3.71□□□□□ -1.82
UBA52P62987 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.71□□□□□ -1.82
UBA52P62987 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.71□□□□□ -1.82
UBA52P62987 AC141257.3-201ENST00000572906 215 ntBASIC3.71□□□□□ -1.82
UBA52P62987 MIR3138-201ENST00000585238 82 ntBASIC3.71□□□□□ -1.82
UBA52P62987 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.71□□□□□ -1.82
UBA52P62987 VN1R85P-201ENST00000601587 426 ntBASIC3.71□□□□□ -1.82
UBA52P62987 AC067959.1-201ENST00000604334 379 ntBASIC3.71□□□□□ -1.82
UBA52P62987 ARF4P1-201ENST00000605447 541 ntBASIC3.71□□□□□ -1.82
UBA52P62987 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBA52P62987 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.71□□□□□ -1.82
UBA52P62987 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBA52P62987 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.71□□□□□ -1.82
UBA52P62987 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.7□□□□□ -1.82
UBA52P62987 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 AC125257.1-201ENST00000560400 2930 ntBASIC3.7□□□□□ -1.82
UBA52P62987 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 OR1F12-201ENST00000402365 945 ntBASIC3.7□□□□□ -1.82
UBA52P62987 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.7□□□□□ -1.82
UBA52P62987 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.7□□□□□ -1.82
UBA52P62987 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 AL357520.1-201ENST00000441557 453 ntBASIC3.7□□□□□ -1.82
UBA52P62987 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.7□□□□□ -1.82
UBA52P62987 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.7□□□□□ -1.82
UBA52P62987 AC108463.1-201ENST00000450258 347 ntBASIC3.7□□□□□ -1.82
UBA52P62987 AL162388.1-201ENST00000450912 352 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms