Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC099522.1-202ENST00000514718 367 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.74□□□□□ -1.97
RPL39P62891 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC2.74□□□□□ -1.97
RPL39P62891 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC2.74□□□□□ -1.97
RPL39P62891 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
RPL39P62891 AL121576.1-201ENST00000556055 276 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AC090877.1-201ENST00000561418 344 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.74□□□□□ -1.97
RPL39P62891 MIR7151-201ENST00000617477 60 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AL353684.1-201ENST00000622677 1120 ntBASIC2.74□□□□□ -1.97
RPL39P62891 OR8A1-204ENST00000642111 1145 ntBASIC2.74□□□□□ -1.97
RPL39P62891 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC2.74□□□□□ -1.97
RPL39P62891 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RPL39P62891 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
RPL39P62891 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
RPL39P62891 EED-206ENST00000527888 1422 ntTSL 2 BASIC2.74□□□□□ -1.97
RPL39P62891 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.74□□□□□ -1.97
RPL39P62891 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC2.74□□□□□ -1.97
RPL39P62891 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
RPL39P62891 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
RPL39P62891 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
RPL39P62891 AL137100.1-201ENST00000556703 1620 ntBASIC2.73□□□□□ -1.97
RPL39P62891 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC2.73□□□□□ -1.97
RPL39P62891 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RPL39P62891 RNU1-132P-201ENST00000364300 164 ntBASIC2.73□□□□□ -1.97
RPL39P62891 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC2.73□□□□□ -1.97
RPL39P62891 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.73□□□□□ -1.97
RPL39P62891 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2.73□□□□□ -1.97
RPL39P62891 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.73□□□□□ -1.97
RPL39P62891 RPS29P17-201ENST00000430795 166 ntBASIC2.73□□□□□ -1.97
RPL39P62891 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.73□□□□□ -1.97
RPL39P62891 RN7SL738P-201ENST00000470264 297 ntBASIC2.73□□□□□ -1.97
RPL39P62891 RPS23P1-201ENST00000491662 432 ntBASIC2.73□□□□□ -1.97
RPL39P62891 RN7SL604P-201ENST00000492589 296 ntBASIC2.73□□□□□ -1.97
RPL39P62891 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.73□□□□□ -1.97
RPL39P62891 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.73□□□□□ -1.97
RPL39P62891 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC2.73□□□□□ -1.97
RPL39P62891 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC2.73□□□□□ -1.97
RPL39P62891 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.73□□□□□ -1.97
RPL39P62891 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.73□□□□□ -1.97
RPL39P62891 AC110743.1-201ENST00000584870 478 ntBASIC2.73□□□□□ -1.97
RPL39P62891 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC2.73□□□□□ -1.97
RPL39P62891 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC2.73□□□□□ -1.97
RPL39P62891 AC110741.2-201ENST00000605278 268 ntBASIC2.73□□□□□ -1.97
RPL39P62891 AL034351.1-201ENST00000605288 668 ntBASIC2.73□□□□□ -1.97
RPL39P62891 SDR42E1P1-201ENST00000611327 477 ntBASIC2.73□□□□□ -1.97
RPL39P62891 AL161616.1-201ENST00000611867 286 ntBASIC2.73□□□□□ -1.97
RPL39P62891 MIR7155-201ENST00000615925 56 ntBASIC2.73□□□□□ -1.97
RPL39P62891 MIR6729-201ENST00000618194 65 ntBASIC2.73□□□□□ -1.97
RPL39P62891 AC018445.2-201ENST00000622987 260 ntBASIC2.73□□□□□ -1.97
RPL39P62891 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC2.73□□□□□ -1.97
RPL39P62891 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RPL39P62891 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RPL39P62891 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC2.73□□□□□ -1.97
RPL39P62891 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC2.73□□□□□ -1.97
RPL39P62891 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPL39P62891 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC2.72□□□□□ -1.97
RPL39P62891 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPL39P62891 AC012078.1-201ENST00000405035 1646 ntBASIC2.72□□□□□ -1.97
RPL39P62891 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPL39P62891 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPL39P62891 AL161909.1-201ENST00000397390 712 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AL391417.1-201ENST00000404100 426 ntBASIC2.72□□□□□ -1.97
RPL39P62891 SNORA11.5-201ENST00000408163 128 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC2.72□□□□□ -1.97
RPL39P62891 RPL30P2-201ENST00000414021 291 ntBASIC2.72□□□□□ -1.97
RPL39P62891 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC2.72□□□□□ -1.97
RPL39P62891 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC2.72□□□□□ -1.97
RPL39P62891 AC019050.1-201ENST00000418508 492 ntBASIC2.72□□□□□ -1.97
RPL39P62891 CYP4F29P-201ENST00000420685 446 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AC002075.2-201ENST00000425207 252 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.72□□□□□ -1.97
RPL39P62891 RPS11P1-201ENST00000451072 473 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AC009963.2-201ENST00000453431 138 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AC099560.2-201ENST00000457554 255 ntBASIC2.72□□□□□ -1.97
RPL39P62891 RN7SL329P-201ENST00000467740 299 ntBASIC2.72□□□□□ -1.97
RPL39P62891 RN7SL860P-201ENST00000473738 223 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AC111000.3-201ENST00000508057 576 ntBASIC2.72□□□□□ -1.97
RPL39P62891 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPL39P62891 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.72□□□□□ -1.97
RPL39P62891 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.72□□□□□ -1.97
RPL39P62891 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.72□□□□□ -1.97
RPL39P62891 SUMO2P20-201ENST00000520803 283 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.72□□□□□ -1.97
RPL39P62891 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPL39P62891 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC2.72□□□□□ -1.97
RPL39P62891 AC044860.2-201ENST00000561005 179 ntBASIC2.72□□□□□ -1.97
RPL39P62891 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPL39P62891 MIR4310-201ENST00000582950 57 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC2.72□□□□□ -1.97
RPL39P62891 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms