Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AF186996.5-201ENST00000418098 904 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN20P56880 AC092648.1-201ENST00000425870 423 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 VN1R54P-201ENST00000435210 1049 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.51□□□□□ -1.69
CLDN20P56880 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN20P56880 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN20P56880 TXNP5-201ENST00000441043 315 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 RPL7AP61-201ENST00000443410 636 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN20P56880 MTND1P33-201ENST00000446251 917 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AL935212.3-201ENST00000450729 284 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN20P56880 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN20P56880 GYG1P1-201ENST00000460864 698 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AC108751.2-201ENST00000469993 231 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 RN7SL319P-201ENST00000480656 221 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN20P56880 AC140172.1-201ENST00000502928 141 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN20P56880 MRPS33P2-201ENST00000507850 322 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 RPS27AP18-201ENST00000515536 459 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 Y_RNA.717-201ENST00000517106 92 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 RPL23AP53-201ENST00000521854 457 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.51□□□□□ -1.69
CLDN20P56880 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.51□□□□□ -1.69
CLDN20P56880 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN20P56880 NDUFB4P11-201ENST00000560510 395 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.51□□□□□ -1.69
CLDN20P56880 CYP2C60P-201ENST00000566088 139 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AC023824.3-201ENST00000569003 562 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 MTATP6P24-201ENST00000576835 677 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN20P56880 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN20P56880 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.51□□□□□ -1.69
CLDN20P56880 AC087283.1-201ENST00000604029 1074 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AC140725.3-201ENST00000616193 880 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.51□□□□□ -1.69
CLDN20P56880 AC123767.1-202ENST00000620407 817 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AC006963.1-201ENST00000624003 1052 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AL121594.5-201ENST00000631724 573 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLDN20P56880 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN20P56880 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 AC027228.2-201ENST00000567141 2154 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN20P56880 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN20P56880 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN20P56880 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN20P56880 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN20P56880 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CLDN20P56880 AC093775.1-201ENST00000624154 1868 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC000123.3-201ENST00000624029 4975 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN20P56880 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN20P56880 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLDN20P56880 RNU6-1339P-201ENST00000363574 91 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 RNU6-353P-201ENST00000364266 108 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLDN20P56880 MIR550A3-201ENST00000390735 95 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 Y_RNA.578-201ENST00000390903 88 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN20P56880 RPS7P9-201ENST00000414704 586 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN20P56880 TMBIM7P-201ENST00000418074 855 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN20P56880 OR2AM1P-201ENST00000422137 422 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN20P56880 CDY14P-201ENST00000431260 1014 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 RPS24P8-201ENST00000431490 402 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN20P56880 RPS29P9-201ENST00000440360 171 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 CDY12P-201ENST00000440679 1015 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 TPTE2P3-201ENST00000441562 1189 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 CDY13P-201ENST00000445813 1015 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 MTND2P8-201ENST00000450555 1025 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 CDY23P-201ENST00000451661 1014 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN20P56880 RNU7-140P-201ENST00000459546 60 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN20P56880 RN7SL441P-201ENST00000492388 296 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN20P56880 ENPP7P9-201ENST00000514456 627 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC026407.1-201ENST00000518369 204 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN20P56880 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN20P56880 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN20P56880 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN20P56880 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN20P56880 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms