Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AL049779.2-201ENST00000553847 315 ntBASIC4.64□□□□□ -1.67
CDH12P55289 SETP1-201ENST00000556014 845 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH12P55289 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.64□□□□□ -1.67
CDH12P55289 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH12P55289 MIR5708-201ENST00000579723 85 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH12P55289 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.64□□□□□ -1.67
CDH12P55289 AC124856.1-201ENST00000600819 896 ntBASIC4.64□□□□□ -1.67
CDH12P55289 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH12P55289 AP000255.1-201ENST00000610276 676 ntBASIC4.64□□□□□ -1.67
CDH12P55289 TUSC7.1-201ENST00000610969 165 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AL139407.1-201ENST00000613826 1175 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AC078883.4-201ENST00000623218 367 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AC026422.1-201ENST00000623961 452 ntBASIC4.64□□□□□ -1.67
CDH12P55289 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH12P55289 CASC19-264ENST00000641912 1184 ntBASIC4.64□□□□□ -1.67
CDH12P55289 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH12P55289 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH12P55289 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH12P55289 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH12P55289 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH12P55289 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH12P55289 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
CDH12P55289 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 U3.2-201ENST00000362981 210 ntBASIC4.63□□□□□ -1.67
CDH12P55289 SNORD113-6-201ENST00000363345 75 ntBASIC4.63□□□□□ -1.67
CDH12P55289 RN7SKP160-201ENST00000363804 340 ntBASIC4.63□□□□□ -1.67
CDH12P55289 SNORD116-8-201ENST00000384365 95 ntBASIC4.63□□□□□ -1.67
CDH12P55289 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDH12P55289 MIR1303-201ENST00000408625 86 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH12P55289 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH12P55289 QRSL1P2-201ENST00000418582 964 ntBASIC4.63□□□□□ -1.67
CDH12P55289 SLC35E1P1-201ENST00000419313 864 ntBASIC4.63□□□□□ -1.67
CDH12P55289 OR6C64P-201ENST00000419708 825 ntBASIC4.63□□□□□ -1.67
CDH12P55289 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDH12P55289 AL365338.1-201ENST00000422282 858 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH12P55289 AP001324.1-201ENST00000428553 399 ntBASIC4.63□□□□□ -1.67
CDH12P55289 TXNL1P1-201ENST00000429528 554 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH12P55289 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH12P55289 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH12P55289 AP000936.3-201ENST00000438127 255 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH12P55289 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH12P55289 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH12P55289 AL035551.1-201ENST00000446931 348 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AURKAPS1-201ENST00000451805 1212 ntBASIC4.63□□□□□ -1.67
CDH12P55289 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH12P55289 AC009127.1-201ENST00000467090 155 ntBASIC4.63□□□□□ -1.67
CDH12P55289 TRBV8-2-201ENST00000475637 270 ntBASIC4.63□□□□□ -1.67
CDH12P55289 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 RPL7P39-201ENST00000481157 744 ntBASIC4.63□□□□□ -1.67
CDH12P55289 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH12P55289 AC104109.1-201ENST00000498563 436 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AC073358.1-201ENST00000505671 684 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AC113347.3-201ENST00000509113 148 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AC105313.1-201ENST00000509121 353 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH12P55289 RN7SKP46-201ENST00000515942 234 ntBASIC4.63□□□□□ -1.67
CDH12P55289 SNORA3.4-201ENST00000515969 96 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH12P55289 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH12P55289 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH12P55289 AP001542.2-201ENST00000593141 364 ntBASIC4.63□□□□□ -1.67
CDH12P55289 TAS2R6P-201ENST00000605022 826 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AP003392.5-201ENST00000607857 415 ntBASIC4.63□□□□□ -1.67
CDH12P55289 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 AP000238.1-201ENST00000608759 426 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AC055764.2-201ENST00000610089 670 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AP003497.2-201ENST00000624220 967 ntBASIC4.63□□□□□ -1.67
CDH12P55289 AL049767.1-202ENST00000637826 242 ntBASIC4.63□□□□□ -1.67
CDH12P55289 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CDH12P55289 MTCO1P6-201ENST00000481192 1384 ntBASIC4.63□□□□□ -1.67
CDH12P55289 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH12P55289 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms