Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 MIR93-201ENST00000385024 80 ntBASIC4.08□□□□□ -1.76
RFC3P40938 OR6C69P-201ENST00000394268 893 ntBASIC4.08□□□□□ -1.76
RFC3P40938 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RFC3P40938 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 AC011933.1-201ENST00000413334 321 ntBASIC4.08□□□□□ -1.76
RFC3P40938 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC3P40938 RPS26P47-201ENST00000427219 348 ntBASIC4.08□□□□□ -1.76
RFC3P40938 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.08□□□□□ -1.76
RFC3P40938 RPS29P17-201ENST00000430795 166 ntBASIC4.08□□□□□ -1.76
RFC3P40938 RPL23AP43-201ENST00000446445 471 ntBASIC4.08□□□□□ -1.76
RFC3P40938 CLIC4P1-201ENST00000453177 535 ntBASIC4.08□□□□□ -1.76
RFC3P40938 RPL7P32-201ENST00000457119 744 ntBASIC4.08□□□□□ -1.76
RFC3P40938 AC116533.1-201ENST00000459748 321 ntBASIC4.08□□□□□ -1.76
RFC3P40938 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.08□□□□□ -1.76
RFC3P40938 PPIAP21-201ENST00000464473 501 ntBASIC4.08□□□□□ -1.76
RFC3P40938 AL672167.3-201ENST00000465951 960 ntBASIC4.08□□□□□ -1.76
RFC3P40938 RN7SL41P-201ENST00000476144 297 ntBASIC4.08□□□□□ -1.76
RFC3P40938 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC3P40938 HSPD1P11-201ENST00000508643 1702 ntBASIC4.08□□□□□ -1.76
RFC3P40938 NDUFB4P12-201ENST00000513465 390 ntBASIC4.08□□□□□ -1.76
RFC3P40938 SNORA31.9-201ENST00000516429 84 ntBASIC4.08□□□□□ -1.76
RFC3P40938 MTCYBP19-201ENST00000517463 1124 ntBASIC4.08□□□□□ -1.76
RFC3P40938 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.08□□□□□ -1.76
RFC3P40938 SEC11B-201ENST00000518383 499 ntBASIC4.08□□□□□ -1.76
RFC3P40938 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC3P40938 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.08□□□□□ -1.76
RFC3P40938 AC084033.1-201ENST00000550830 633 ntBASIC4.08□□□□□ -1.76
RFC3P40938 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.08□□□□□ -1.76
RFC3P40938 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC3P40938 AC015912.2-201ENST00000571053 181 ntBASIC4.08□□□□□ -1.76
RFC3P40938 MIR3138-201ENST00000585238 82 ntBASIC4.08□□□□□ -1.76
RFC3P40938 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.08□□□□□ -1.76
RFC3P40938 ADAD1P2-201ENST00000588476 646 ntBASIC4.08□□□□□ -1.76
RFC3P40938 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC3P40938 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.08□□□□□ -1.76
RFC3P40938 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RFC3P40938 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC3P40938 AC130352.1-201ENST00000602979 661 ntBASIC4.08□□□□□ -1.76
RFC3P40938 AC234782.5-201ENST00000617723 324 ntBASIC4.08□□□□□ -1.76
RFC3P40938 MIR7154-201ENST00000620673 73 ntBASIC4.08□□□□□ -1.76
RFC3P40938 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.08□□□□□ -1.76
RFC3P40938 AC093535.2-201ENST00000624769 2326 ntBASIC4.08□□□□□ -1.76
RFC3P40938 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
RFC3P40938 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFC3P40938 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFC3P40938 AC011266.1-201ENST00000624119 3569 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AC087565.3-202ENST00000642085 1603 ntBASIC4.07□□□□□ -1.76
RFC3P40938 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
RFC3P40938 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RFC3P40938 RNA5SP52-201ENST00000362448 134 ntBASIC4.07□□□□□ -1.76
RFC3P40938 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RFC3P40938 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RFC3P40938 AL034374.1-201ENST00000406329 351 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.07□□□□□ -1.76
RFC3P40938 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.07□□□□□ -1.76
RFC3P40938 RPL21P43-201ENST00000425440 472 ntBASIC4.07□□□□□ -1.76
RFC3P40938 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.07□□□□□ -1.76
RFC3P40938 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.07□□□□□ -1.76
RFC3P40938 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.07□□□□□ -1.76
RFC3P40938 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.07□□□□□ -1.76
RFC3P40938 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.07□□□□□ -1.76
RFC3P40938 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.07□□□□□ -1.76
RFC3P40938 CACYBPP1-201ENST00000438592 684 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AL353748.1-201ENST00000440753 474 ntBASIC4.07□□□□□ -1.76
RFC3P40938 GEMIN8P3-201ENST00000445417 720 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AC104651.2-201ENST00000447549 528 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AL157884.3-201ENST00000448273 1184 ntBASIC4.07□□□□□ -1.76
RFC3P40938 APOOP2-201ENST00000461561 539 ntBASIC4.07□□□□□ -1.76
RFC3P40938 RN7SL303P-201ENST00000469773 251 ntBASIC4.07□□□□□ -1.76
RFC3P40938 RN7SL810P-201ENST00000493031 276 ntBASIC4.07□□□□□ -1.76
RFC3P40938 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.07□□□□□ -1.76
RFC3P40938 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.07□□□□□ -1.76
RFC3P40938 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.07□□□□□ -1.76
RFC3P40938 AC117525.1-201ENST00000515228 503 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.07□□□□□ -1.76
RFC3P40938 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFC3P40938 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.07□□□□□ -1.76
RFC3P40938 AL049874.4-201ENST00000557593 255 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.07□□□□□ -1.76
RFC3P40938 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.07□□□□□ -1.76
RFC3P40938 AC090312.1-201ENST00000580637 348 ntBASIC4.07□□□□□ -1.76
RFC3P40938 OR1AB1P-201ENST00000585564 761 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AC084373.1-201ENST00000603311 235 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AC074276.2-201ENST00000619891 348 ntBASIC4.07□□□□□ -1.76
RFC3P40938 AC006065.6-201ENST00000625201 545 ntBASIC4.07□□□□□ -1.76
RFC3P40938 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.07□□□□□ -1.76
RFC3P40938 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFC3P40938 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFC3P40938 AP000756.2-201ENST00000624168 2567 ntBASIC4.07□□□□□ -1.76
RFC3P40938 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFC3P40938 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFC3P40938 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RFC3P40938 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms