Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.8□□□□□ -1.48
COL15A1P39059 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.8□□□□□ -1.48
COL15A1P39059 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL15A1P39059 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL15A1P39059 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL15A1P39059 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL15A1P39059 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 AL672167.2-201ENST00000377164 879 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 RNU6-354P-201ENST00000383862 107 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 RNU6-610P-201ENST00000384264 107 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 RPS26P8-201ENST00000393490 348 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 ATP5F1P2-201ENST00000398143 760 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
COL15A1P39059 AL160175.1-201ENST00000428124 247 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 RPL7P33-201ENST00000444159 742 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 PHBP16-201ENST00000446318 950 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 HMGB1P26-201ENST00000452520 628 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.8□□□□□ -1.48
COL15A1P39059 AC041039.1-201ENST00000485656 536 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC091167.1-201ENST00000492017 396 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL15A1P39059 RNA5SP249-201ENST00000516127 99 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 SNORA31.9-201ENST00000516429 84 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC010376.1-201ENST00000522101 334 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.8□□□□□ -1.48
COL15A1P39059 AC025884.1-201ENST00000556034 378 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.8□□□□□ -1.48
COL15A1P39059 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.8□□□□□ -1.48
COL15A1P39059 CBX3P2-202ENST00000583365 535 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.8□□□□□ -1.48
COL15A1P39059 AC011492.1-201ENST00000600023 315 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 IPO5P1-202ENST00000600039 287 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AL591034.3-201ENST00000605511 685 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 AL023881.1-201ENST00000621088 301 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC093875.1-201ENST00000623688 504 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AL445487.1-201ENST00000415694 1580 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC245100.2-201ENST00000454544 1679 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 ASNSP1-204ENST00000641977 1664 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.79□□□□□ -1.48
COL15A1P39059 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.79□□□□□ -1.48
COL15A1P39059 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL15A1P39059 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL15A1P39059 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.79□□□□□ -1.48
COL15A1P39059 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.79□□□□□ -1.48
COL15A1P39059 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.79□□□□□ -1.48
COL15A1P39059 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.79□□□□□ -1.48
COL15A1P39059 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
COL15A1P39059 AC104118.1-201ENST00000607625 1589 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.79□□□□□ -1.48
COL15A1P39059 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL15A1P39059 RNA5SP366-201ENST00000365454 123 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 RNA5SP317-201ENST00000410176 116 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 RNA5SP311-201ENST00000411290 116 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 PTP4A1P7-201ENST00000423476 514 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 AL158073.1-201ENST00000426848 1104 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 BX119904.1-201ENST00000432026 348 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 AC004938.1-201ENST00000438468 308 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.79□□□□□ -1.48
COL15A1P39059 EEF1A1P1-201ENST00000447052 739 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 AC069277.2-201ENST00000454211 432 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 RPS17P11-201ENST00000474297 293 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 TPT1P3-201ENST00000492841 512 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.79□□□□□ -1.48
COL15A1P39059 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL15A1P39059 AC098862.1-201ENST00000504991 413 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 AC114322.1-201ENST00000506771 926 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 SUMO2P5-201ENST00000506790 245 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 RNA5SP315-201ENST00000516340 116 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 RNA5SP312-201ENST00000517068 116 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 HMGB1P23-201ENST00000518743 568 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 MIR4509-3-201ENST00000578671 94 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 MIR4509-2-201ENST00000583920 94 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.79□□□□□ -1.48
COL15A1P39059 AC006116.5-201ENST00000591936 559 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 AC069431.2-201ENST00000604149 1099 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 LSM1P2-201ENST00000604911 322 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 AC112220.2-201ENST00000605513 533 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 AC020634.1-201ENST00000608701 549 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 MIR4509-1-201ENST00000618224 94 ntBASIC5.79□□□□□ -1.48
COL15A1P39059 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.79□□□□□ -1.48
COL15A1P39059 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.79□□□□□ -1.48
COL15A1P39059 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.79□□□□□ -1.48
COL15A1P39059 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.78□□□□□ -1.48
COL15A1P39059 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL15A1P39059 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL15A1P39059 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL15A1P39059 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.78□□□□□ -1.48
COL15A1P39059 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
COL15A1P39059 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.78□□□□□ -1.48
COL15A1P39059 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.78□□□□□ -1.48
COL15A1P39059 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL15A1P39059 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms