Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF1P30408 CDH12P2-201ENST00000504393 298 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF1P30408 IFITM8P-201ENST00000522529 394 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 AC018442.3-201ENST00000523025 183 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 AP001284.1-201ENST00000528393 2118 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF1P30408 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.46□□□□□ -1.54
TM4SF1P30408 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.46□□□□□ -1.54
TM4SF1P30408 AC093014.1-201ENST00000548926 724 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.46□□□□□ -1.54
TM4SF1P30408 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF1P30408 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.46□□□□□ -1.54
TM4SF1P30408 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF1P30408 AL049844.2-201ENST00000604280 628 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 AL451086.1-201ENST00000605596 223 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 RNU4-89P-201ENST00000607443 133 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF1P30408 AC090617.9-201ENST00000623751 147 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.46□□□□□ -1.54
TM4SF1P30408 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF1P30408 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF1P30408 AL359715.4-201ENST00000606629 1436 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF1P30408 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TM4SF1P30408 AC139769.1-204ENST00000472297 1931 ntBASIC5.46□□□□□ -1.54
TM4SF1P30408 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TM4SF1P30408 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TM4SF1P30408 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 RNA5SP387-201ENST00000364226 106 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TM4SF1P30408 ENSAP1-201ENST00000392855 326 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 HMGB1P10-201ENST00000395823 563 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 RPL17P50-201ENST00000396131 546 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 RPL21P65-201ENST00000406094 466 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 RPL7P2-201ENST00000427639 268 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.45□□□□□ -1.54
TM4SF1P30408 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.45□□□□□ -1.54
TM4SF1P30408 PSMC1P13-201ENST00000458195 985 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC091564.1-201ENST00000464563 479 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.45□□□□□ -1.54
TM4SF1P30408 AC037198.2-201ENST00000478845 733 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 NPM1P17-201ENST00000479221 602 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 RWDD4P1-201ENST00000488019 565 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC146944.2-203ENST00000502493 354 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 AC139495.1-202ENST00000513164 354 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 RN7SKP141-201ENST00000516167 338 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 RNA5SP73-201ENST00000516744 108 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 RNA5SP230-201ENST00000517039 122 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.45□□□□□ -1.54
TM4SF1P30408 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.45□□□□□ -1.54
TM4SF1P30408 OR4R2P-201ENST00000530815 597 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 DYNLL1P4-201ENST00000549314 266 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 HNRNPCP4-201ENST00000571636 900 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.45□□□□□ -1.54
TM4SF1P30408 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.45□□□□□ -1.54
TM4SF1P30408 SUMO2P14-201ENST00000604488 293 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 AC084824.5-201ENST00000612009 413 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC099669.2-201ENST00000616549 437 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC010608.2-201ENST00000624830 470 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 AC097372.4-201ENST00000625025 466 ntBASIC5.45□□□□□ -1.54
TM4SF1P30408 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TM4SF1P30408 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TM4SF1P30408 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TM4SF1P30408 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TM4SF1P30408 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF1P30408 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.45□□□□□ -1.54
TM4SF1P30408 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
TM4SF1P30408 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TM4SF1P30408 RNA5SP151-201ENST00000365632 117 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 RNU6-650P-201ENST00000365658 111 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms