Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-156P-201ENST00000621869 107 ntBASIC5.22□□□□□ -1.57
CD40P25942 SEPT14P19-203ENST00000633205 211 ntBASIC5.22□□□□□ -1.57
CD40P25942 U6.101-201ENST00000637707 76 ntBASIC5.22□□□□□ -1.57
CD40P25942 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CD40P25942 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 SHQ1P1-201ENST00000437111 1544 ntBASIC5.22□□□□□ -1.57
CD40P25942 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40P25942 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CD40P25942 AC020633.1-201ENST00000468439 2247 ntBASIC5.21□□□□□ -1.57
CD40P25942 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.21□□□□□ -1.58
CD40P25942 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.21□□□□□ -1.58
CD40P25942 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CD40P25942 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CD40P25942 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.21□□□□□ -1.58
CD40P25942 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 RNU6-289P-201ENST00000364093 107 ntBASIC5.21□□□□□ -1.58
CD40P25942 AC087752.1-201ENST00000391360 558 ntBASIC5.21□□□□□ -1.58
CD40P25942 RPL35AP3-201ENST00000414680 288 ntBASIC5.21□□□□□ -1.58
CD40P25942 MTND1P23-201ENST00000416931 372 ntBASIC5.21□□□□□ -1.58
CD40P25942 USP9YP13-201ENST00000417797 480 ntBASIC5.21□□□□□ -1.58
CD40P25942 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.21□□□□□ -1.58
CD40P25942 AIMP1P1-201ENST00000418670 937 ntBASIC5.21□□□□□ -1.58
CD40P25942 BX284632.2-201ENST00000421091 399 ntBASIC5.21□□□□□ -1.58
CD40P25942 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.21□□□□□ -1.58
CD40P25942 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.21□□□□□ -1.58
CD40P25942 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.21□□□□□ -1.58
CD40P25942 AL512605.1-202ENST00000441919 381 ntBASIC5.21□□□□□ -1.58
CD40P25942 GDI2P2-201ENST00000445131 608 ntBASIC5.21□□□□□ -1.58
CD40P25942 AL359955.2-201ENST00000445380 353 ntBASIC5.21□□□□□ -1.58
CD40P25942 MTCO1P27-201ENST00000448269 226 ntBASIC5.21□□□□□ -1.58
CD40P25942 GEMIN2P1-201ENST00000454246 752 ntBASIC5.21□□□□□ -1.58
CD40P25942 RN7SL269P-201ENST00000467795 305 ntBASIC5.21□□□□□ -1.58
CD40P25942 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 TMED11P-201ENST00000479478 690 ntBASIC5.21□□□□□ -1.58
CD40P25942 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.21□□□□□ -1.58
CD40P25942 FAM172BP-201ENST00000487497 1089 ntBASIC5.21□□□□□ -1.58
CD40P25942 RPL30P11-201ENST00000495304 339 ntBASIC5.21□□□□□ -1.58
CD40P25942 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 AC114781.3-201ENST00000512083 142 ntBASIC5.21□□□□□ -1.58
CD40P25942 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.21□□□□□ -1.58
CD40P25942 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.21□□□□□ -1.58
CD40P25942 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.21□□□□□ -1.58
CD40P25942 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.21□□□□□ -1.58
CD40P25942 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 AC092121.1-201ENST00000569452 202 ntBASIC5.21□□□□□ -1.58
CD40P25942 MIR5186-201ENST00000577504 120 ntBASIC5.21□□□□□ -1.58
CD40P25942 MIR544B-201ENST00000582372 78 ntBASIC5.21□□□□□ -1.58
CD40P25942 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.21□□□□□ -1.58
CD40P25942 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.21□□□□□ -1.58
CD40P25942 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.21□□□□□ -1.58
CD40P25942 AC095031.1-201ENST00000623685 672 ntBASIC5.21□□□□□ -1.58
CD40P25942 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CD40P25942 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CD40P25942 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CD40P25942 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CD40P25942 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CD40P25942 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD40P25942 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD40P25942 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.2□□□□□ -1.58
CD40P25942 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.2□□□□□ -1.58
CD40P25942 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.2□□□□□ -1.58
CD40P25942 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CD40P25942 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.2□□□□□ -1.58
CD40P25942 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD40P25942 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CD40P25942 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.2□□□□□ -1.58
CD40P25942 RNA5SP435-201ENST00000364044 108 ntBASIC5.2□□□□□ -1.58
CD40P25942 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD40P25942 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CD40P25942 EIF5P1-201ENST00000400019 1231 ntBASIC5.2□□□□□ -1.58
CD40P25942 HMGB1P17-201ENST00000403495 628 ntBASIC5.2□□□□□ -1.58
CD40P25942 AL023807.1-201ENST00000407932 359 ntBASIC5.2□□□□□ -1.58
CD40P25942 AL133384.1-201ENST00000412744 351 ntBASIC5.2□□□□□ -1.58
CD40P25942 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.2□□□□□ -1.58
CD40P25942 NMD3P2-201ENST00000421815 761 ntBASIC5.2□□□□□ -1.58
CD40P25942 AL035660.1-201ENST00000422041 222 ntBASIC5.2□□□□□ -1.58
CD40P25942 MTND4LP11-201ENST00000422184 280 ntBASIC5.2□□□□□ -1.58
CD40P25942 AC007568.1-201ENST00000422912 471 ntBASIC5.2□□□□□ -1.58
CD40P25942 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.2□□□□□ -1.58
CD40P25942 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.2□□□□□ -1.58
CD40P25942 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms