Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 FO393419.3-201ENST00000428741 282 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFRAP16234 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFRAP16234 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PDGFRAP16234 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFRAP16234 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.82□□□□□ -1.64
PDGFRAP16234 AC008628.1-201ENST00000508663 265 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 AC007016.1-201ENST00000512110 244 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFRAP16234 AC027338.1-201ENST00000514840 825 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFRAP16234 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFRAP16234 AC022882.1-201ENST00000532142 501 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFRAP16234 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFRAP16234 RN7SL690P-201ENST00000582087 240 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFRAP16234 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFRAP16234 AC234771.5-201ENST00000600161 514 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFRAP16234 AC004232.3-201ENST00000622977 525 ntBASIC4.82□□□□□ -1.64
PDGFRAP16234 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFRAP16234 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFRAP16234 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFRAP16234 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFRAP16234 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFRAP16234 MFSD8-216ENST00000641147 4009 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 GTF2H2B-203ENST00000508065 1432 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PDGFRAP16234 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PDGFRAP16234 SNORA62.2-201ENST00000364672 152 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 AL049697.2-201ENST00000403708 294 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 HMGB1P13-201ENST00000406019 642 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 Y_RNA.625-201ENST00000411256 107 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFRAP16234 LINC01347-201ENST00000417964 355 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 AL121882.1-201ENST00000422893 417 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 IPMKP1-201ENST00000425988 855 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 AL162388.1-201ENST00000450912 352 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 IFNWP4-201ENST00000453148 294 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 RN7SL459P-201ENST00000481078 302 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.81□□□□□ -1.64
PDGFRAP16234 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFRAP16234 MTND4LP2-201ENST00000502312 285 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
PDGFRAP16234 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFRAP16234 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFRAP16234 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFRAP16234 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 AP003049.1-201ENST00000529418 457 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.81□□□□□ -1.64
PDGFRAP16234 AP005119.2-201ENST00000579735 1105 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.81□□□□□ -1.64
PDGFRAP16234 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFRAP16234 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFRAP16234 AC079880.2-201ENST00000603790 1213 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 AC011374.2-201ENST00000607135 526 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 AL512506.1-201ENST00000613918 449 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PDGFRAP16234 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFRAP16234 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFRAP16234 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFRAP16234 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 KARSP3-201ENST00000571212 1504 ntBASIC4.81□□□□□ -1.64
PDGFRAP16234 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.81□□□□□ -1.64
PDGFRAP16234 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PDGFRAP16234 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PDGFRAP16234 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PDGFRAP16234 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFRAP16234 OR51H2P-202ENST00000641424 3046 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFRAP16234 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 RNA5SP332-201ENST00000391063 115 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 GLULP6-201ENST00000399502 913 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.8□□□□□ -1.64
PDGFRAP16234 AC245028.1-201ENST00000423259 256 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 RPS24P8-201ENST00000431490 402 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 RPS27P5-201ENST00000444247 244 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 AC006463.2-201ENST00000473326 348 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms