Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
MMP3P08254 EXOSC3P1-201ENST00000448649 500 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.13□□□□□ -1.59
MMP3P08254 AC239798.3-201ENST00000454459 408 ntBASIC5.13□□□□□ -1.59
MMP3P08254 RPS3AP6-201ENST00000484430 795 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC008427.1-201ENST00000503102 655 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.13□□□□□ -1.59
MMP3P08254 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.13□□□□□ -1.59
MMP3P08254 RNU6-1308P-201ENST00000516817 103 ntBASIC5.13□□□□□ -1.59
MMP3P08254 MTCYBP19-201ENST00000517463 1124 ntBASIC5.13□□□□□ -1.59
MMP3P08254 HIGD1AP18-201ENST00000520730 278 ntBASIC5.13□□□□□ -1.59
MMP3P08254 NPM1P35-201ENST00000533043 868 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC087477.6-201ENST00000559595 843 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.13□□□□□ -1.59
MMP3P08254 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.13□□□□□ -1.59
MMP3P08254 MIR1254-2-201ENST00000579553 63 ntBASIC5.13□□□□□ -1.59
MMP3P08254 MIR3138-201ENST00000585238 82 ntBASIC5.13□□□□□ -1.59
MMP3P08254 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP3P08254 AC068020.1-201ENST00000594215 661 ntBASIC5.13□□□□□ -1.59
MMP3P08254 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
MMP3P08254 AP001160.4-201ENST00000596971 382 ntBASIC5.13□□□□□ -1.59
MMP3P08254 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP3P08254 AC130352.1-201ENST00000602979 661 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC025175.1-201ENST00000606482 759 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AL451049.1-201ENST00000608672 497 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC087683.2-201ENST00000611384 326 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC140725.3-201ENST00000616193 880 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AL122125.1-201ENST00000616999 600 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC093875.1-201ENST00000623688 504 ntBASIC5.13□□□□□ -1.59
MMP3P08254 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.13□□□□□ -1.59
MMP3P08254 AC097655.1-201ENST00000635075 318 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC006927.2-201ENST00000639256 389 ntBASIC5.13□□□□□ -1.59
MMP3P08254 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP3P08254 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MMP3P08254 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MMP3P08254 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
MMP3P08254 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP3P08254 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP3P08254 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP3P08254 MTND5P23-201ENST00000430812 1655 ntBASIC5.12□□□□□ -1.59
MMP3P08254 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP3P08254 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP3P08254 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP3P08254 MIR133A2-201ENST00000347538 102 ntBASIC5.12□□□□□ -1.59
MMP3P08254 RNU5E-10P-201ENST00000363506 118 ntBASIC5.12□□□□□ -1.59
MMP3P08254 HMGB1P10-201ENST00000395823 563 ntBASIC5.12□□□□□ -1.59
MMP3P08254 SDHCP2-201ENST00000398565 501 ntBASIC5.12□□□□□ -1.59
MMP3P08254 RNU2-22P-201ENST00000411266 212 ntBASIC5.12□□□□□ -1.59
MMP3P08254 VN1R51P-201ENST00000411675 945 ntBASIC5.12□□□□□ -1.59
MMP3P08254 TMSB10P2-201ENST00000416049 131 ntBASIC5.12□□□□□ -1.59
MMP3P08254 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP3P08254 AC104333.2-201ENST00000422630 192 ntBASIC5.12□□□□□ -1.59
MMP3P08254 DEFB130D-201ENST00000426866 237 ntBASIC5.12□□□□□ -1.59
MMP3P08254 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP3P08254 TPTE2P3-201ENST00000441562 1189 ntBASIC5.12□□□□□ -1.59
MMP3P08254 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP3P08254 RPS17P11-201ENST00000474297 293 ntBASIC5.12□□□□□ -1.59
MMP3P08254 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP3P08254 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP3P08254 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.12□□□□□ -1.59
MMP3P08254 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP3P08254 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP3P08254 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.12□□□□□ -1.59
MMP3P08254 RNU6-276P-201ENST00000516114 96 ntBASIC5.12□□□□□ -1.59
MMP3P08254 Y_RNA.717-201ENST00000517106 92 ntBASIC5.12□□□□□ -1.59
MMP3P08254 FTH1P11-201ENST00000517577 551 ntBASIC5.12□□□□□ -1.59
MMP3P08254 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.12□□□□□ -1.59
MMP3P08254 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP3P08254 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP3P08254 BNIP3P5-201ENST00000562290 498 ntBASIC5.12□□□□□ -1.59
MMP3P08254 AC106734.1-201ENST00000568646 663 ntBASIC5.12□□□□□ -1.59
MMP3P08254 CYCSP40-201ENST00000575927 294 ntBASIC5.12□□□□□ -1.59
MMP3P08254 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP3P08254 SNX6P1-201ENST00000601728 1224 ntBASIC5.12□□□□□ -1.59
MMP3P08254 AL022067.1-201ENST00000602426 454 ntBASIC5.12□□□□□ -1.59
MMP3P08254 AC084373.1-201ENST00000603311 235 ntBASIC5.12□□□□□ -1.59
MMP3P08254 AL157392.4-201ENST00000609756 345 ntBASIC5.12□□□□□ -1.59
MMP3P08254 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP3P08254 AC009951.1-201ENST00000623674 2614 ntBASIC5.12□□□□□ -1.59
MMP3P08254 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP3P08254 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP3P08254 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP3P08254 VN2R3P-201ENST00000422626 1412 ntBASIC5.12□□□□□ -1.59
MMP3P08254 SALL4P2-201ENST00000423288 2910 ntBASIC5.12□□□□□ -1.59
MMP3P08254 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP3P08254 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.12□□□□□ -1.59
MMP3P08254 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP3P08254 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP3P08254 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MMP3P08254 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP3P08254 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP3P08254 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 AL731566.1-201ENST00000620490 1937 ntBASIC5.11□□□□□ -1.59
MMP3P08254 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
MMP3P08254 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
MMP3P08254 AC008549.2-201ENST00000333482 706 ntBASIC5.11□□□□□ -1.59
MMP3P08254 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms