Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC007991.1-201ENST00000522680 631 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.92□□□□□ -1.62
COL1A1P02452 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.92□□□□□ -1.62
COL1A1P02452 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.92□□□□□ -1.62
COL1A1P02452 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.92□□□□□ -1.62
COL1A1P02452 AC063950.1-201ENST00000552036 308 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.92□□□□□ -1.62
COL1A1P02452 AC005255.1-201ENST00000593748 216 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 AC069200.1-201ENST00000609511 323 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 AL354798.1-201ENST00000622505 329 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 AC015908.5-201ENST00000623289 343 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL1A1P02452 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.92□□□□□ -1.62
COL1A1P02452 DDX18P4-201ENST00000511690 1966 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL1A1P02452 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.91□□□□□ -1.62
COL1A1P02452 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL1A1P02452 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
COL1A1P02452 RNA5SP399-201ENST00000364003 117 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 RPS23P10-201ENST00000416185 486 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 RBMY1KP-201ENST00000423480 476 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 AC091390.3-201ENST00000426478 338 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.91□□□□□ -1.62
COL1A1P02452 RAD23BP3-201ENST00000454157 1152 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 AC012158.1-204ENST00000483430 465 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 RNU7-143P-201ENST00000516781 65 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL1A1P02452 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.91□□□□□ -1.62
COL1A1P02452 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.91□□□□□ -1.62
COL1A1P02452 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.91□□□□□ -1.62
COL1A1P02452 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.91□□□□□ -1.62
COL1A1P02452 AL121772.2-201ENST00000614331 297 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 AL121890.2-201ENST00000617644 465 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 MIR7154-201ENST00000620673 73 ntBASIC4.91□□□□□ -1.62
COL1A1P02452 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL1A1P02452 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL1A1P02452 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.91□□□□□ -1.62
COL1A1P02452 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL1A1P02452 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
COL1A1P02452 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.9□□□□□ -1.62
COL1A1P02452 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL1A1P02452 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL1A1P02452 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL1A1P02452 RNU6-213P-201ENST00000384051 104 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 MIR7-3-201ENST00000384898 110 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL1A1P02452 AL607077.1-201ENST00000401718 499 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.9□□□□□ -1.62
COL1A1P02452 CYCSP10-201ENST00000417973 294 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 AC073335.1-201ENST00000427776 363 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.9□□□□□ -1.62
COL1A1P02452 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.9□□□□□ -1.62
COL1A1P02452 RPL29P14-201ENST00000495837 428 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
COL1A1P02452 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.9□□□□□ -1.62
COL1A1P02452 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL1A1P02452 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.9□□□□□ -1.62
COL1A1P02452 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.9□□□□□ -1.62
COL1A1P02452 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.9□□□□□ -1.62
COL1A1P02452 QTRT1P1-201ENST00000604344 1078 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 AC084757.4-201ENST00000616350 526 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 AC244100.1-202ENST00000621554 382 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 AC073530.2-201ENST00000623987 261 ntBASIC4.9□□□□□ -1.62
COL1A1P02452 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
COL1A1P02452 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.9□□□□□ -1.63
COL1A1P02452 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL1A1P02452 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL1A1P02452 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL1A1P02452 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL1A1P02452 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL1A1P02452 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.9□□□□□ -1.63
COL1A1P02452 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.9□□□□□ -1.63
COL1A1P02452 AC023632.6-201ENST00000624338 2177 ntBASIC4.89□□□□□ -1.63
COL1A1P02452 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL1A1P02452 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL1A1P02452 RNA5SP146-201ENST00000410743 123 ntBASIC4.89□□□□□ -1.63
COL1A1P02452 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.89□□□□□ -1.63
COL1A1P02452 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.89□□□□□ -1.63
COL1A1P02452 GOT2P5-201ENST00000433995 546 ntBASIC4.89□□□□□ -1.63
COL1A1P02452 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.89□□□□□ -1.63
COL1A1P02452 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.89□□□□□ -1.63
COL1A1P02452 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL1A1P02452 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.89□□□□□ -1.63
COL1A1P02452 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.89□□□□□ -1.63
COL1A1P02452 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.89□□□□□ -1.63
COL1A1P02452 AL031666.3-201ENST00000609320 1006 ntBASIC4.89□□□□□ -1.63
COL1A1P02452 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.89□□□□□ -1.63
COL1A1P02452 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.89□□□□□ -1.63
COL1A1P02452 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL1A1P02452 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL1A1P02452 AL929601.4-201ENST00000613011 1341 ntBASIC4.89□□□□□ -1.63
COL1A1P02452 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL1A1P02452 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL1A1P02452 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.89□□□□□ -1.63
COL1A1P02452 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.89□□□□□ -1.63
COL1A1P02452 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms