Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC099063.2-201ENST00000446360 662 ntBASIC4.7□□□□□ -1.66
LDLRP01130 HMGB1P26-201ENST00000452520 628 ntBASIC4.7□□□□□ -1.66
LDLRP01130 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.7□□□□□ -1.66
LDLRP01130 RN7SL443P-201ENST00000464331 290 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.7□□□□□ -1.66
LDLRP01130 AC103987.1-201ENST00000473394 348 ntBASIC4.7□□□□□ -1.66
LDLRP01130 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.7□□□□□ -1.66
LDLRP01130 ARL4AP1-201ENST00000503220 705 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.7□□□□□ -1.66
LDLRP01130 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.7□□□□□ -1.66
LDLRP01130 TCP11X3P-202ENST00000514289 1254 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AC034205.1-201ENST00000520621 638 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.7□□□□□ -1.66
LDLRP01130 AP003066.2-201ENST00000529375 555 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.7□□□□□ -1.66
LDLRP01130 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.7□□□□□ -1.66
LDLRP01130 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.7□□□□□ -1.66
LDLRP01130 PARP1P2-201ENST00000556806 195 ntBASIC4.7□□□□□ -1.66
LDLRP01130 IMMP1LP1-201ENST00000605170 488 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AL008729.2-201ENST00000606393 473 ntBASIC4.7□□□□□ -1.66
LDLRP01130 VN1R9P-201ENST00000614184 867 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AC138907.10-201ENST00000623708 983 ntBASIC4.7□□□□□ -1.66
LDLRP01130 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LDLRP01130 AC068057.2-201ENST00000624047 895 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AC010608.3-201ENST00000625048 527 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AC004808.1-201ENST00000627671 721 ntBASIC4.7□□□□□ -1.66
LDLRP01130 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LDLRP01130 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.7□□□□□ -1.66
LDLRP01130 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 AP001273.1-201ENST00000624493 3152 ntBASIC4.69□□□□□ -1.66
LDLRP01130 AC093535.2-201ENST00000624769 2326 ntBASIC4.69□□□□□ -1.66
LDLRP01130 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
LDLRP01130 DDX18P4-201ENST00000511690 1966 ntBASIC4.69□□□□□ -1.66
LDLRP01130 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.69□□□□□ -1.66
LDLRP01130 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LDLRP01130 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LDLRP01130 AC008549.2-201ENST00000333482 706 ntBASIC4.69□□□□□ -1.66
LDLRP01130 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 U3.3-201ENST00000362986 216 ntBASIC4.69□□□□□ -1.66
LDLRP01130 SNORA73.1-201ENST00000363107 205 ntBASIC4.69□□□□□ -1.66
LDLRP01130 RNA5SP455-201ENST00000365190 119 ntBASIC4.69□□□□□ -1.66
LDLRP01130 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 AC023128.2-201ENST00000420880 1223 ntBASIC4.69□□□□□ -1.66
LDLRP01130 AC092447.3-201ENST00000426027 686 ntBASIC4.69□□□□□ -1.66
LDLRP01130 AC011242.1-201ENST00000433596 1158 ntBASIC4.69□□□□□ -1.66
LDLRP01130 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.69□□□□□ -1.66
LDLRP01130 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.69□□□□□ -1.66
LDLRP01130 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.69□□□□□ -1.66
LDLRP01130 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.69□□□□□ -1.66
LDLRP01130 AL691482.1-201ENST00000453255 87 ntBASIC4.69□□□□□ -1.66
LDLRP01130 RPL23AP72-201ENST00000492447 435 ntBASIC4.69□□□□□ -1.66
LDLRP01130 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.69□□□□□ -1.66
LDLRP01130 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.69□□□□□ -1.66
LDLRP01130 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.69□□□□□ -1.66
LDLRP01130 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.69□□□□□ -1.66
LDLRP01130 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.69□□□□□ -1.66
LDLRP01130 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.69□□□□□ -1.66
LDLRP01130 UBE2FP2-201ENST00000566646 462 ntBASIC4.69□□□□□ -1.66
LDLRP01130 AC106734.1-201ENST00000568646 663 ntBASIC4.69□□□□□ -1.66
LDLRP01130 MIR4691-201ENST00000583764 85 ntBASIC4.69□□□□□ -1.66
LDLRP01130 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.69□□□□□ -1.66
LDLRP01130 AC084782.3-201ENST00000612282 578 ntBASIC4.69□□□□□ -1.66
LDLRP01130 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.69□□□□□ -1.66
LDLRP01130 CU459211.1-201ENST00000635667 749 ntBASIC4.69□□□□□ -1.66
LDLRP01130 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.69□□□□□ -1.66
LDLRP01130 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDLRP01130 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.69□□□□□ -1.66
LDLRP01130 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.69□□□□□ -1.66
LDLRP01130 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.69□□□□□ -1.66
LDLRP01130 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
LDLRP01130 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 SDAD1P1-202ENST00000524156 2051 ntBASIC4.68□□□□□ -1.66
LDLRP01130 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LDLRP01130 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.68□□□□□ -1.66
LDLRP01130 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.68□□□□□ -1.66
LDLRP01130 NUDT19P3-201ENST00000404698 555 ntBASIC4.68□□□□□ -1.66
LDLRP01130 HMGB1P13-201ENST00000406019 642 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AL355615.1-201ENST00000406187 641 ntBASIC4.68□□□□□ -1.66
LDLRP01130 RN7SKP222-201ENST00000410651 315 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.68□□□□□ -1.66
LDLRP01130 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms