Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRABD2BA6NFA1 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRABD2BA6NFA1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.41□□□□□ -1.7
TRABD2BA6NFA1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRABD2BA6NFA1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 MAPK10-320ENST00000641462 6696 ntBASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 DHX9P1-201ENST00000436565 3076 ntBASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 AC022893.2-201ENST00000564832 3296 ntBASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
TRABD2BA6NFA1 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 RNA5SP366-201ENST00000365454 123 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AP000580.1-201ENST00000404439 358 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 RPS12P5-201ENST00000423449 371 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC007563.3-201ENST00000433233 371 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC108463.1-201ENST00000450258 347 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 RN7SL98P-201ENST00000462271 300 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 RPL23AP37-201ENST00000479658 549 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 FABP5P6-201ENST00000510588 409 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 RPS27AP18-201ENST00000515536 459 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC008126.1-201ENST00000549019 480 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 DUX4L52-201ENST00000549363 777 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 MIMT1-201ENST00000597105 1050 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC073137.1-201ENST00000605636 634 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AL133370.2-201ENST00000619934 439 ntBASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRABD2BA6NFA1 AC018529.3-201ENST00000624212 2254 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AC139713.2-215ENST00000641428 5037 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 OR10J6P-201ENST00000289731 930 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 RNU6-40P-201ENST00000384254 107 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 RNU6-883P-201ENST00000384597 107 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 MIR137-201ENST00000385223 102 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 CCNB2P1-201ENST00000399411 1150 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 PPIAP31-201ENST00000405422 495 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 RPS3AP54-201ENST00000435535 734 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 RPL23AP93-201ENST00000440847 484 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 BUD31P2-201ENST00000449374 300 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 MTND5P8-201ENST00000449817 1083 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 HMGB3P13-201ENST00000511263 607 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 MTND2P7-201ENST00000521337 640 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AL162574.2-201ENST00000614618 657 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 MIR6075-201ENST00000620782 95 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AP003499.2-201ENST00000624100 483 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AC019080.5-201ENST00000624891 757 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 AC006453.5-201ENST00000636451 619 ntBASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.39□□□□□ -1.71
TRABD2BA6NFA1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRABD2BA6NFA1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms