Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 AC022726.1-201ENST00000587475 207 ntBASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 AC234771.5-201ENST00000600161 514 ntBASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 WBP1LP8-201ENST00000617401 327 ntBASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 CDRT1-208ENST00000630868 794 ntBASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC01558Q9Y6Z2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LINC01558Q9Y6Z2 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC2.09□□□□□ -2.08
LINC01558Q9Y6Z2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LINC01558Q9Y6Z2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
LINC01558Q9Y6Z2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 RNA5SP335-201ENST00000363817 110 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 RNA5SP394-201ENST00000364216 119 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 RNA5SP455-201ENST00000365190 119 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 SNORA51.9-201ENST00000384295 124 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 HMGB1P20-201ENST00000402555 677 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AL136116.1-201ENST00000403591 381 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 RN7SKP123-201ENST00000410732 291 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 RNA5SP31-201ENST00000411144 127 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 RNA5SP107-201ENST00000411358 122 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC114755.2-201ENST00000413520 361 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 HMGB3P23-201ENST00000414981 585 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 RPL7P46-201ENST00000425129 740 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 NDUFS5P5-201ENST00000437256 321 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 OR52U1P-201ENST00000439752 923 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 H3F3AP5-201ENST00000475267 429 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC091868.1-201ENST00000508746 304 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 HMGN1P17-201ENST00000513734 295 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 RN7SKP21-201ENST00000516503 220 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 SNORA43.3-201ENST00000517240 103 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC009643.1-201ENST00000532030 391 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AP000619.3-201ENST00000535634 1127 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AL109766.1-201ENST00000555080 552 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 MAGOH2P-202ENST00000584384 429 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC011477.5-201ENST00000586571 259 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC008507.1-201ENST00000587506 734 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC091488.1-201ENST00000604239 660 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AL390816.3-201ENST00000604527 1066 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AL391358.1-201ENST00000605342 190 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AL451074.6-201ENST00000608512 729 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC007497.1-201ENST00000610421 561 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 FAM27B-201ENST00000610601 213 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AL355578.1-201ENST00000607405 1328 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC117529.2-201ENST00000512159 2068 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 MTND5P7-201ENST00000413558 1798 ntBASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01558Q9Y6Z2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms