Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MAPK10-323ENST00000641493 3207 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC007993.1-201ENST00000621298 2430 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC011155.1-201ENST00000316512 456 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 Y_RNA.100-201ENST00000363141 102 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 Y_RNA.231-201ENST00000364358 102 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 SNORA22B-201ENST00000383876 138 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 RNU6-331P-201ENST00000384724 107 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AL031679.1-201ENST00000400616 525 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC008280.1-201ENST00000418851 412 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 MYL6P3-201ENST00000436904 432 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 DDX3P2-201ENST00000446138 111 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 RPL23AP15-201ENST00000450202 459 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 RPS26P11-201ENST00000463445 348 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 SLC25A51P1-201ENST00000468432 871 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 RPS26P6-201ENST00000475156 348 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC068587.1-201ENST00000483613 781 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC090453.1-201ENST00000495560 436 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC114324.2-202ENST00000503812 134 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 HMGB3P15-201ENST00000507326 574 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 RNU6-410P-201ENST00000517006 107 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 OR5BK1P-201ENST00000550421 823 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 ACTG1P15-201ENST00000570019 1063 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 MIR378C-201ENST00000578683 81 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC098848.2-201ENST00000588023 330 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 VN1R84P-201ENST00000593697 235 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC020765.1-201ENST00000604296 328 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AL391813.2-201ENST00000609113 322 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AC084781.2-201ENST00000615568 161 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AL133216.2-202ENST00000634512 349 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 MTND4LP32-201ENST00000636111 270 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 AF287957.1-201ENST00000607368 1595 ntBASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDHB11Q9Y5F2 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 MTCO1P12-201ENST00000414273 1543 ntBASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 CDY19P-201ENST00000411668 1613 ntBASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 CDY18P-201ENST00000438294 1609 ntBASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 MRE11P1-201ENST00000464884 2127 ntBASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 RPL12P13-201ENST00000310055 497 ntBASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 RNU6-1309P-201ENST00000363305 108 ntBASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 RN7SKP44-201ENST00000363602 316 ntBASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 RNU6-606P-201ENST00000384721 111 ntBASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 Y_RNA.615-201ENST00000410769 117 ntBASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHB11Q9Y5F2 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms