Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MIR4691-201ENST00000583764 85 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC008814.1-201ENST00000603797 406 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC080013.6-201ENST00000606185 215 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC011374.2-201ENST00000607135 526 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC073569.3-201ENST00000619055 682 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC107021.2-201ENST00000567714 2095 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC073136.1-201ENST00000449426 2884 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 THAP12P5-201ENST00000405864 2275 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AL606537.1-201ENST00000607258 2011 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 SNORA66-201ENST00000384792 133 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 YWHAZP2-201ENST00000440317 728 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 CALM1P2-201ENST00000452941 448 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC011037.1-201ENST00000483964 558 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 CEACAMP10-202ENST00000495431 496 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC034244.1-201ENST00000507687 207 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 MTCO3P28-201ENST00000513351 515 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC119751.1-201ENST00000513357 765 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 HMGB1P1-201ENST00000522557 636 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC006518.2-201ENST00000542513 940 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC063949.1-201ENST00000552900 865 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 BGLT3-201ENST00000564523 994 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AC100847.1-201ENST00000611316 481 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AL121890.2-201ENST00000617644 465 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AP004607.9-201ENST00000618202 316 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 ZNF876P-202ENST00000398732 1485 ntBASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX2IPQ9Y2D8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 RNA5SP428-201ENST00000365129 132 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 RNU6-729P-201ENST00000384399 107 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 MT-TP-201ENST00000387461 68 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 SNORA48.4-201ENST00000391089 134 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 RPL23AP59-201ENST00000399415 461 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 MTCO1P56-201ENST00000401674 224 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 HMGB3P31-201ENST00000413333 595 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 RPS7P9-201ENST00000414704 586 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AL590806.1-201ENST00000415818 853 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 LINC01347-201ENST00000417964 355 ntBASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX2IPQ9Y2D8 OR2AM1P-201ENST00000422137 422 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms