Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RNU6-213P-201ENST00000384051 104 ntBASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 AL358472.1-201ENST00000431295 329 ntBASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 AC027176.2-201ENST00000559166 746 ntBASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 AC005412.1-201ENST00000580812 1049 ntBASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 AL606490.9-201ENST00000603331 271 ntBASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 MIR6868-201ENST00000611215 58 ntBASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHANK2Q9UPX8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 FAM91A3P-201ENST00000456826 2544 ntBASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 AC007068.1-201ENST00000396690 844 ntBASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 AC100770.1-201ENST00000532310 322 ntBASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 RPL21P7-201ENST00000557463 483 ntBASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 AC110743.1-201ENST00000584870 478 ntBASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 AC064801.1-201ENST00000612025 407 ntBASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHANK2Q9UPX8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 ACEA_U3.1-201ENST00000363057 217 ntBASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 AL161631.1-201ENST00000417933 486 ntBASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 AC087369.1-201ENST00000520775 996 ntBASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 AC007991.1-201ENST00000522680 631 ntBASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 AC106782.4-201ENST00000568264 210 ntBASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 AP005264.7-201ENST00000625003 745 ntBASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SHANK2Q9UPX8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 AC016588.2-201ENST00000632484 3021 ntBASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 AP000907.1-201ENST00000428428 510 ntBASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 HPRT1P2-201ENST00000505250 544 ntBASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 MIR3936-201ENST00000584304 110 ntBASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHANK2Q9UPX8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 MIR183-201ENST00000384958 110 ntBASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 AC083863.1-201ENST00000438811 231 ntBASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 AC063950.1-201ENST00000552036 308 ntBASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHANK2Q9UPX8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 HMGB3P19-201ENST00000403971 560 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 FCF1P7-201ENST00000451185 558 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 RN7SKP83-201ENST00000516512 178 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 SOD1P3-201ENST00000518682 454 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 GTF2IP22-201ENST00000554443 182 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 SLC25A36P1-201ENST00000590111 465 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 AC015922.4-201ENST00000612568 690 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 MIR7702-201ENST00000621931 59 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 AC024023.1-201ENST00000624530 922 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 AP001002.2-201ENST00000625137 386 ntBASIC6.09□□□□□ -1.43
SHANK2Q9UPX8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms