Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
TRIM35Q9UPQ4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.93□□□□□ -0.98
TRIM35Q9UPQ4 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
TRIM35Q9UPQ4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 XPOTP1-201ENST00000443317 2398 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 ZNF806-201ENST00000438300 1774 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 RNU6-545P-201ENST00000362681 104 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 RNU6-582P-201ENST00000362989 107 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AL672212.1-201ENST00000422246 400 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AC000089.1-201ENST00000424559 801 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AHCYP8-201ENST00000425108 209 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 EIF1P2-201ENST00000428233 350 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 RPL3P11-201ENST00000434028 1146 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AC079781.2-201ENST00000446424 169 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AC092647.2-201ENST00000452998 253 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 RPS4XP18-201ENST00000495480 763 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 RPL23AP80-201ENST00000495605 424 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 SNX18P23-201ENST00000510867 677 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 RN7SKP92-201ENST00000517266 244 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 OR5D17P-201ENST00000531492 978 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AC009779.6-201ENST00000603972 165 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 IGHV3-29-201ENST00000604817 344 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AC027559.1-201ENST00000636288 271 ntBASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.92□□□□□ -0.98
TRIM35Q9UPQ4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC093278.2-201ENST00000564956 2485 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC007993.1-201ENST00000621298 2430 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 RPL24P4-201ENST00000326586 421 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 RNU6-1093P-201ENST00000391194 107 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 NDUFS5P1-201ENST00000405668 289 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 RPL12P23-201ENST00000405880 490 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 RPS10P21-201ENST00000430654 475 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 PCBP2P1-201ENST00000437262 977 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 DEFB109F-201ENST00000491870 277 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 SETP7-201ENST00000552169 453 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC089984.3-201ENST00000552838 363 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC010287.1-201ENST00000566916 357 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC098848.2-201ENST00000588023 330 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AC092608.2-201ENST00000624427 218 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 AL732372.2-225ENST00000642124 456 ntBASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM35Q9UPQ4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms