Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC025750.1-201ENST00000399891 379 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AL445189.1-201ENST00000405722 338 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC087650.1-201ENST00000431445 468 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 RPS6P2-201ENST00000454208 705 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC023043.4-201ENST00000612081 449 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 HSPD1P11-201ENST00000508643 1702 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 OR2X1P-201ENST00000421144 687 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 RAD23BP3-201ENST00000454157 1152 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 RPS4XP15-201ENST00000489210 795 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 FTH1P21-201ENST00000512179 511 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 HMGB1P23-201ENST00000518743 568 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AL160290.3-201ENST00000604869 165 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 AL021997.2-201ENST00000615674 271 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 A2MP1-204ENST00000566278 4130 ntBASIC3.97□□□□□ -1.77
CCDC88CQ9P219 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC88CQ9P219 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC88CQ9P219 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.77
CCDC88CQ9P219 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
CCDC88CQ9P219 LINC01355-201ENST00000566551 5444 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 RN7SKP247-201ENST00000411094 308 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 AC011742.1-201ENST00000431448 434 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 RPS4XP4-201ENST00000443195 763 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 RPL21P89-201ENST00000444021 467 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 AC006326.1-201ENST00000445465 787 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 AC090948.2-201ENST00000607363 564 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 THAP12P8-201ENST00000447914 2115 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 CASC19-255ENST00000641733 1385 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 AL592182.3-201ENST00000642132 3304 ntBASIC3.96□□□□□ -1.78
CCDC88CQ9P219 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC88CQ9P219 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 YY1P1-201ENST00000427625 668 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC120057.2-201ENST00000571520 271 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC107993.1-201ENST00000591343 684 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC079587.1-201ENST00000603846 277 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC015813.4-201ENST00000610469 179 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 FAM27D1-201ENST00000612308 341 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC245389.2-201ENST00000616023 576 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 LINC00901.1-201ENST00000617252 152 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms