Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 GTF2IP4-201ENST00000453092 2054 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 RNA5SP88-201ENST00000365560 109 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 Y_RNA.372-201ENST00000365599 102 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 Y_RNA.450-201ENST00000384198 113 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC004386.1-201ENST00000393214 761 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 CCNG1P1-201ENST00000406783 885 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AL354890.1-201ENST00000413730 346 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 RWDD4P2-201ENST00000426392 563 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 DPY19L1P2-201ENST00000426647 915 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 MTND4LP10-201ENST00000435146 291 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 RPL7P29-201ENST00000437151 728 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 ATP5LP2-201ENST00000440646 311 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 MTND4LP16-201ENST00000440828 295 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 USP9YP8-201ENST00000441913 500 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC244505.5-201ENST00000443639 207 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 SDC4P-201ENST00000453285 601 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 HMGN2P25-201ENST00000486956 268 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 RNY4P37-201ENST00000516225 96 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 RNU6-1004P-201ENST00000516584 111 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC137768.1-201ENST00000549998 553 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AL049779.3-201ENST00000557141 606 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC008507.3-201ENST00000585753 472 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC025857.2-201ENST00000602711 238 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC078795.3-201ENST00000602913 472 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC027807.2-201ENST00000616099 408 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 MIR1910-201ENST00000636955 80 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 MTND5P17-201ENST00000418405 1603 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC137056.2-201ENST00000624055 1958 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC093909.5-201ENST00000621839 1799 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 AC017104.4-201ENST00000636283 1592 ntBASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 KYNUP3-201ENST00000574386 1341 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC008033.1-201ENST00000216407 1162 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 RNU6-181P-201ENST00000363225 107 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 RN7SKP275-201ENST00000364626 301 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 RNU6-297P-201ENST00000384636 107 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 FGF7P8-201ENST00000402994 292 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 CIR1P3-201ENST00000405137 479 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL590002.1-201ENST00000406554 418 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 FCF1P10-201ENST00000407590 479 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC245096.1-201ENST00000413104 546 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 RPL17P12-201ENST00000413391 526 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL121878.1-201ENST00000418638 859 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 GAPDHP49-201ENST00000421421 961 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms