Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.67□□□□□ -1.5
HPS3Q969F9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.67□□□□□ -1.5
HPS3Q969F9 MIR3912-201ENST00000577566 105 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 BPTFP1-201ENST00000579209 492 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.67□□□□□ -1.5
HPS3Q969F9 MIR4666A-201ENST00000580160 79 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.67□□□□□ -1.5
HPS3Q969F9 AC021171.1-201ENST00000603137 706 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AL139407.1-201ENST00000613826 1175 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AL158163.2-201ENST00000619110 700 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.67□□□□□ -1.5
HPS3Q969F9 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.67□□□□□ -1.5
HPS3Q969F9 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
HPS3Q969F9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HPS3Q969F9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
HPS3Q969F9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HPS3Q969F9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HPS3Q969F9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.67□□□□□ -1.5
HPS3Q969F9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HPS3Q969F9 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HPS3Q969F9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.67□□□□□ -1.5
HPS3Q969F9 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HPS3Q969F9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
HPS3Q969F9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HPS3Q969F9 SGO1P1-201ENST00000603525 1447 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HPS3Q969F9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.66□□□□□ -1.5
HPS3Q969F9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HPS3Q969F9 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HPS3Q969F9 snoZ40.1-201ENST00000364540 72 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 NUDT19P3-201ENST00000404698 555 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 AL008987.1-201ENST00000415528 237 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.66□□□□□ -1.5
HPS3Q969F9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.66□□□□□ -1.5
HPS3Q969F9 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.66□□□□□ -1.5
HPS3Q969F9 MTND5P25-201ENST00000430499 799 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HPS3Q969F9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.66□□□□□ -1.5
HPS3Q969F9 HMGB1P48-201ENST00000446155 598 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 AC021660.1-201ENST00000465006 554 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 RN7SL799P-201ENST00000475891 298 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 GAPDHP39-201ENST00000481866 979 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.66□□□□□ -1.5
HPS3Q969F9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HPS3Q969F9 RNU5A-4P-201ENST00000516588 111 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.66□□□□□ -1.5
HPS3Q969F9 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.66□□□□□ -1.5
HPS3Q969F9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.66□□□□□ -1.5
HPS3Q969F9 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.66□□□□□ -1.5
HPS3Q969F9 AL359219.2-201ENST00000555184 348 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 AC068714.1-201ENST00000559623 800 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 AC005412.1-201ENST00000580812 1049 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.66□□□□□ -1.5
HPS3Q969F9 NTAN1P1-201ENST00000603150 646 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.66□□□□□ -1.5
HPS3Q969F9 AC018926.3-201ENST00000618841 406 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.66□□□□□ -1.5
HPS3Q969F9 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.66□□□□□ -1.5
HPS3Q969F9 CDRT1-208ENST00000630868 794 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 CU459211.1-201ENST00000635667 749 ntBASIC5.66□□□□□ -1.5
HPS3Q969F9 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HPS3Q969F9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HPS3Q969F9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HPS3Q969F9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HPS3Q969F9 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HPS3Q969F9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.66□□□□□ -1.5
HPS3Q969F9 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HPS3Q969F9 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AC011755.1-201ENST00000623763 2049 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HPS3Q969F9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HPS3Q969F9 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HPS3Q969F9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HPS3Q969F9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
HPS3Q969F9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 RPL23P2-201ENST00000320371 421 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 SNORA2.3-201ENST00000383920 135 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 MIR16-1-201ENST00000385271 89 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 TMSB4XP8-201ENST00000402089 135 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.65□□□□□ -1.5
HPS3Q969F9 TMSB4XP6-201ENST00000415187 135 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 TMSB4XP1-201ENST00000424567 135 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 USP9YP11-201ENST00000427537 717 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS3Q969F9 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.65□□□□□ -1.5
HPS3Q969F9 CNOT7P2-201ENST00000441051 832 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 AL589765.3-201ENST00000446084 462 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 AL591623.2-201ENST00000449978 222 ntBASIC5.65□□□□□ -1.5
HPS3Q969F9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HPS3Q969F9 SBDSP1-204ENST00000453858 737 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms