Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC107982.3-201ENST00000584957 985 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC005086.4-201ENST00000623065 213 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 USP9YP4-201ENST00000424401 1745 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 CDC27P2-201ENST00000425026 1922 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC068870.3-201ENST00000625077 2536 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 MTND4LP21-201ENST00000415303 295 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AL031584.1-201ENST00000447169 754 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 VN1R32P-201ENST00000452234 905 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC026403.1-201ENST00000518938 295 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC022655.2-201ENST00000577280 318 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 MIR3944-201ENST00000581277 108 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC012468.1-201ENST00000604888 430 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 AL353726.1-201ENST00000614041 1000 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC244100.1-202ENST00000621554 382 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 FAM91A3P-201ENST00000456826 2544 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 AP001002.1-201ENST00000625148 1513 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 MIR1271-201ENST00000408537 86 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 RNU4-6P-201ENST00000410804 122 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 AC112206.1-201ENST00000468416 477 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 AC091544.1-201ENST00000484702 348 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 AF213884.1-201ENST00000488102 463 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 RNU6-352P-201ENST00000516908 107 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 IGKV2-23-201ENST00000518729 323 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 AC006064.5-201ENST00000541782 248 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 AL352979.3-201ENST00000553515 247 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 BNIP3P39-201ENST00000601077 554 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 AC002069.2-201ENST00000603580 883 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 AL713998.2-201ENST00000604538 1198 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 AC017076.1-201ENST00000607613 578 ntBASIC5.13□□□□□ -1.59
SNED1Q8TER0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNED1Q8TER0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.13□□□□□ -1.59
SNED1Q8TER0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNED1Q8TER0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNED1Q8TER0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC006971.1-201ENST00000407916 4486 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC116667.1-201ENST00000604855 2072 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 CASC19-204ENST00000641001 2055 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 RNA5SP372-201ENST00000390836 115 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms