Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SPTSSBQ8NFR3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 RAD1P1-201ENST00000231383 813 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 RNA5SP335-201ENST00000363817 110 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 RN7SKP167-201ENST00000411047 285 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 NPM1P4-201ENST00000414095 812 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 TRGV6-201ENST00000417928 299 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AL139158.1-201ENST00000424719 340 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 ELOCP6-201ENST00000429066 328 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 ATP5HP2-201ENST00000433885 485 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC096638.2-201ENST00000434965 711 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 CBX1P4-201ENST00000439415 457 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC245047.2-201ENST00000441060 530 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 TRIM60P18-201ENST00000441518 828 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 TXNP2-201ENST00000443918 295 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AL139135.2-201ENST00000445040 433 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 KNOP1P3-201ENST00000446933 426 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AL935212.3-201ENST00000450729 284 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 IGHV5-78-201ENST00000450948 295 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 ELOCP12-201ENST00000458706 328 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 RN7SL93P-201ENST00000463035 293 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC006517.1-201ENST00000480485 328 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 HMGB3P15-201ENST00000507326 574 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 COX6B1P5-201ENST00000509843 249 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 MTCO1P49-201ENST00000523429 802 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AL049839.1-201ENST00000556151 657 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 KPNA2P3-201ENST00000584190 848 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC011477.5-201ENST00000586571 259 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC234771.5-201ENST00000600161 514 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC073137.1-201ENST00000605636 634 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 MIR6762-201ENST00000613340 86 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 CASC19-274ENST00000642018 970 ntBASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SPTSSBQ8NFR3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 NMD3P1-201ENST00000439704 1488 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 RNU1-150P-201ENST00000362491 162 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 RNA5SP189-201ENST00000364920 115 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 SNORA71.2-201ENST00000364941 134 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AL590762.2-201ENST00000395798 571 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 SDHCP2-201ENST00000398565 501 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AL034374.1-201ENST00000406329 351 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 OR4K12P-201ENST00000406538 961 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 IL6-206ENST00000407492 926 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms