Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 RPL7L1P4-201ENST00000513004 707 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 ATP5LP3-201ENST00000514223 304 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 OR5AZ1P-201ENST00000527448 943 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC245505.1-201ENST00000556398 224 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 OR4G1P-201ENST00000588632 938 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC006270.3-201ENST00000605967 1036 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC109309.2-201ENST00000612597 332 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC095031.1-201ENST00000623685 672 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 LINC01808-202ENST00000641680 1116 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC007342.7-201ENST00000624610 2337 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 RNA5SP183-201ENST00000362452 119 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 ATP5F1P4-201ENST00000397288 746 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 RN7SKP263-201ENST00000411194 309 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 RN7SKP142-201ENST00000411236 328 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 GPS2P1-201ENST00000411761 986 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC007899.1-201ENST00000412776 775 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 SPRYD7P1-201ENST00000443861 570 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 COX6CP2-201ENST00000444980 225 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 CFTRP1-201ENST00000456646 183 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC091959.2-201ENST00000477363 321 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 PGAM1P13-201ENST00000507497 754 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 GTF2F2P1-201ENST00000511083 675 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 CDC42P3-201ENST00000518493 633 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC106038.2-201ENST00000520706 568 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC092709.1-201ENST00000521355 1045 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 MIR4489-201ENST00000578869 62 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC022467.1-201ENST00000614738 749 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 CYP4F35P-202ENST00000636121 390 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 OR55B1P-203ENST00000641518 2602 ntBASIC5.22□□□□□ -1.57
VRK3Q8IV63 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VRK3Q8IV63 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VRK3Q8IV63 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VRK3Q8IV63 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.21□□□□□ -1.57
VRK3Q8IV63 ADAM24P-201ENST00000398655 2101 ntBASIC5.21□□□□□ -1.57
VRK3Q8IV63 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VRK3Q8IV63 MTND4P29-201ENST00000503122 1372 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VRK3Q8IV63 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VRK3Q8IV63 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VRK3Q8IV63 U3.2-201ENST00000362981 210 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 RNU6-560P-201ENST00000364007 108 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 RNU1-149P-201ENST00000390870 161 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AL512430.2-201ENST00000406786 339 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 RPS3AP24-201ENST00000407896 734 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 RNA5SP487-201ENST00000410186 122 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 AL356968.2-201ENST00000412769 1257 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 AL354766.1-201ENST00000423396 542 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 415.4 ms