Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF43Q68DV7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 RNU6-254P-201ENST00000363377 107 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 Y_RNA.138-201ENST00000363462 102 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 RNU1-49P-201ENST00000363468 159 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 SNORA51.9-201ENST00000384295 124 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 RNA5SP284-201ENST00000384547 118 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 USP9YP13-201ENST00000417797 480 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 CYP4F30P-202ENST00000420048 405 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 AL451074.3-201ENST00000437709 472 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 SPRYD7P1-201ENST00000443861 570 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 ARPC3P2-201ENST00000457786 533 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AC098847.1-201ENST00000473094 348 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 PSMA2P2-201ENST00000504319 686 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 AC011352.3-201ENST00000505162 593 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AP002748.2-201ENST00000528671 348 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 CBX3P5-201ENST00000552017 521 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 MRPS21P8-201ENST00000569196 235 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 MIR3668-201ENST00000582138 75 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AP005137.2-201ENST00000609238 400 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF43Q68DV7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF43Q68DV7 AC025470.1-201ENST00000510053 2032 ntBASIC6.43□□□□□ -1.38
RNF43Q68DV7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF43Q68DV7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF43Q68DV7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF43Q68DV7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF43Q68DV7 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF43Q68DV7 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF43Q68DV7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF43Q68DV7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 AL592429.1-201ENST00000403909 1473 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF43Q68DV7 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF43Q68DV7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF43Q68DV7 Y_RNA.58-201ENST00000362807 102 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 Y_RNA.154-201ENST00000363624 102 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 RNY3P1-201ENST00000365085 102 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 RNY3-201ENST00000365484 102 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF43Q68DV7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 Y_RNA.490-201ENST00000384413 102 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 RNU6-738P-201ENST00000384531 106 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF43Q68DV7 MTND3P17-201ENST00000416968 344 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 MTND6P12-201ENST00000428247 522 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 ATP5LP2-201ENST00000440646 311 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 AL161636.2-201ENST00000445179 927 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 AL033528.1-201ENST00000453780 140 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 RPL7AP52-201ENST00000458096 790 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 AL445687.2-201ENST00000458156 728 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF43Q68DV7 RPS3AP14-201ENST00000483907 780 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 AC107398.1-201ENST00000486904 505 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 RN7SL629P-201ENST00000489622 285 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 AC105914.1-201ENST00000511798 226 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF43Q68DV7 OR5AN2P-201ENST00000534535 896 ntBASIC6.42□□□□□ -1.38
RNF43Q68DV7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms