Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 LARP1BP1-201ENST00000506036 1359 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC012078.1-201ENST00000405035 1646 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 MIR365B-201ENST00000362317 111 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 RN7SKP227-201ENST00000364445 330 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 COX6CP15-201ENST00000426313 211 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AC092447.2-201ENST00000435487 669 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 ARL5AP3-201ENST00000439327 386 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 FTH1P2-201ENST00000466086 412 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 RPS27AP13-201ENST00000498403 237 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 MTATP6P9-201ENST00000515039 680 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 RNA5SP49-201ENST00000516450 115 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 RNU6-889P-201ENST00000517189 103 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 CKS1BP1-201ENST00000555221 240 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AL354984.3-201ENST00000604803 325 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AC010857.1-201ENST00000606398 594 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AL445493.3-201ENST00000619568 477 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AC140113.4-201ENST00000622087 222 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 AC010872.1-201ENST00000624225 675 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 FP325313.1-201ENST00000638228 703 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 VPS35P1-201ENST00000563400 1518 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.25□□□□□ -1.57
PDS5AQ29RF7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDS5AQ29RF7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 RNU1-14P-201ENST00000362759 152 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 MIR421-201ENST00000365696 85 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 RPS26P8-201ENST00000393490 348 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AL078604.1-201ENST00000404609 466 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC002524.1-201ENST00000411687 547 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 NRBF2P2-201ENST00000413087 861 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC098592.2-201ENST00000413158 265 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 VN1R31P-201ENST00000417498 730 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 UBTFL3-201ENST00000418934 1024 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 RPS27AP12-201ENST00000429552 465 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 RPEP2-201ENST00000432149 701 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 PPIAP13-201ENST00000434706 478 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC018635.1-201ENST00000468292 1030 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 RN7SL41P-201ENST00000476144 297 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 UBTFL6-201ENST00000477929 1024 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 RN7SKP157-201ENST00000516174 282 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 CYCSP28-201ENST00000534284 321 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 ARF4P1-201ENST00000605447 541 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AL450270.1-201ENST00000606160 391 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AL445363.3-201ENST00000623080 671 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AL133243.3-201ENST00000617415 3004 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 A2MP1-204ENST00000566278 4130 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC093591.2-201ENST00000565254 3843 ntBASIC5.24□□□□□ -1.57
PDS5AQ29RF7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.24□□□□□ -1.57
PDS5AQ29RF7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms