Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.88□□□□□ -1.63
RAE1P78406 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAE1P78406 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAE1P78406 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.88□□□□□ -1.63
RAE1P78406 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAE1P78406 CASC19-221ENST00000641309 1382 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AC100778.3-201ENST00000580060 1750 ntBASIC4.88□□□□□ -1.63
RAE1P78406 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAE1P78406 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RAE1P78406 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.88□□□□□ -1.63
RAE1P78406 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 AC097461.1-201ENST00000568928 2821 ntBASIC4.87□□□□□ -1.63
RAE1P78406 PANDAR-201ENST00000629595 1506 ntBASIC4.87□□□□□ -1.63
RAE1P78406 SGO1P2-201ENST00000429458 1589 ntBASIC4.87□□□□□ -1.63
RAE1P78406 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 AP000776.1-201ENST00000530032 1663 ntBASIC4.87□□□□□ -1.63
RAE1P78406 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAE1P78406 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAE1P78406 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAE1P78406 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.87□□□□□ -1.63
RAE1P78406 AL355852.1-201ENST00000454081 1771 ntBASIC4.87□□□□□ -1.63
RAE1P78406 MIR323A-201ENST00000362199 86 ntBASIC4.87□□□□□ -1.63
RAE1P78406 RNU4-4P-201ENST00000364588 130 ntBASIC4.87□□□□□ -1.63
RAE1P78406 SNORA2.3-201ENST00000383920 135 ntBASIC4.87□□□□□ -1.63
RAE1P78406 MIR600-201ENST00000385007 98 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AC013442.1-201ENST00000397347 228 ntBASIC4.87□□□□□ -1.63
RAE1P78406 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.87□□□□□ -1.63
RAE1P78406 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.87□□□□□ -1.63
RAE1P78406 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.87□□□□□ -1.63
RAE1P78406 PAICSP7-201ENST00000419829 962 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AL139421.1-201ENST00000423010 169 ntBASIC4.87□□□□□ -1.63
RAE1P78406 GTF2IP23-201ENST00000423746 351 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.87□□□□□ -1.63
RAE1P78406 VN1R108P-201ENST00000431580 830 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AL389925.1-201ENST00000432257 728 ntBASIC4.87□□□□□ -1.63
RAE1P78406 BX323845.1-201ENST00000432417 179 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.87□□□□□ -1.63
RAE1P78406 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.87□□□□□ -1.63
RAE1P78406 AL117351.1-201ENST00000438864 766 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AL445567.1-201ENST00000439121 144 ntBASIC4.87□□□□□ -1.63
RAE1P78406 RPS7P5-201ENST00000441482 581 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.87□□□□□ -1.63
RAE1P78406 HMGB1P4-201ENST00000455362 567 ntBASIC4.87□□□□□ -1.63
RAE1P78406 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 RPL23AP12-201ENST00000467573 473 ntBASIC4.87□□□□□ -1.63
RAE1P78406 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.87□□□□□ -1.63
RAE1P78406 AC024558.1-201ENST00000505008 528 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AC116353.3-201ENST00000511215 249 ntBASIC4.87□□□□□ -1.63
RAE1P78406 IGLVIV-64-201ENST00000518581 301 ntBASIC4.87□□□□□ -1.63
RAE1P78406 IGKV2-18-201ENST00000522607 343 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.87□□□□□ -1.63
RAE1P78406 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.87□□□□□ -1.63
RAE1P78406 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.87□□□□□ -1.63
RAE1P78406 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.87□□□□□ -1.63
RAE1P78406 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 IMMP1LP3-201ENST00000604197 224 ntBASIC4.87□□□□□ -1.63
RAE1P78406 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAE1P78406 AC090246.1-201ENST00000616499 426 ntBASIC4.87□□□□□ -1.63
RAE1P78406 BX005214.3-202ENST00000619809 325 ntBASIC4.87□□□□□ -1.63
RAE1P78406 MIR6837-201ENST00000620884 64 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AC016717.3-201ENST00000624730 554 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 Z98755.1-201ENST00000407015 1384 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AC025263.3-201ENST00000622965 1396 ntBASIC4.87□□□□□ -1.63
RAE1P78406 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAE1P78406 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RAE1P78406 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAE1P78406 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
RAE1P78406 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RAE1P78406 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RAE1P78406 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
RAE1P78406 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RAE1P78406 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RAE1P78406 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.86□□□□□ -1.63
RAE1P78406 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RAE1P78406 RNU1-43P-201ENST00000365052 165 ntBASIC4.86□□□□□ -1.63
RAE1P78406 RNU6-619P-201ENST00000365146 108 ntBASIC4.86□□□□□ -1.63
RAE1P78406 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.86□□□□□ -1.63
RAE1P78406 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RAE1P78406 BMS1P3-201ENST00000372011 932 ntBASIC4.86□□□□□ -1.63
RAE1P78406 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RAE1P78406 RNU6-317P-201ENST00000384031 107 ntBASIC4.86□□□□□ -1.63
RAE1P78406 SNORD65.1-201ENST00000390889 71 ntBASIC4.86□□□□□ -1.63
RAE1P78406 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RAE1P78406 DUTP5-201ENST00000406790 469 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.86□□□□□ -1.63
RAE1P78406 AC211486.3-201ENST00000412694 621 ntBASIC4.86□□□□□ -1.63
RAE1P78406 NRBF2P2-201ENST00000413087 861 ntBASIC4.86□□□□□ -1.63
RAE1P78406 OR51A3P-201ENST00000413596 924 ntBASIC4.86□□□□□ -1.63
RAE1P78406 NPM1P4-201ENST00000414095 812 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AC104333.2-201ENST00000422630 192 ntBASIC4.86□□□□□ -1.63
RAE1P78406 AC011233.1-201ENST00000422812 283 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms