Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCNA1P78396 AC009313.2-201ENST00000417893 1941 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNA1P78396 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNA1P78396 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
CCNA1P78396 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
CCNA1P78396 RN7SKP202-201ENST00000410439 330 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 NRBF2P2-201ENST00000413087 861 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 AC009237.10-201ENST00000414112 510 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNA1P78396 RPL23AP25-201ENST00000430973 463 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNA1P78396 RPL12P46-201ENST00000436610 195 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNA1P78396 AC006326.1-201ENST00000445465 787 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNA1P78396 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNA1P78396 ATP1B1P1-201ENST00000509767 915 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 KCTD9P2-201ENST00000512203 1013 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNA1P78396 SNORD116-30-201ENST00000516468 85 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNA1P78396 AC022616.2-201ENST00000523185 300 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNA1P78396 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNA1P78396 AC006130.2-201ENST00000586202 326 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 FAM27D1-201ENST00000612308 341 ntBASIC5.01□□□□□ -1.61
CCNA1P78396 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNA1P78396 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNA1P78396 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CCNA1P78396 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.01□□□□□ -1.61
CCNA1P78396 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCNA1P78396 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNA1P78396 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNA1P78396 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNA1P78396 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCNA1P78396 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNA1P78396 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5□□□□□ -1.61
CCNA1P78396 NXPH1-205ENST00000602349 1953 ntBASIC5□□□□□ -1.61
CCNA1P78396 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCNA1P78396 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
CCNA1P78396 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCNA1P78396 RNA5SP175-201ENST00000364275 119 ntBASIC5□□□□□ -1.61
CCNA1P78396 RNA5SP513-201ENST00000364648 118 ntBASIC5□□□□□ -1.61
CCNA1P78396 RNA5SP283-201ENST00000365604 119 ntBASIC5□□□□□ -1.61
CCNA1P78396 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCNA1P78396 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5□□□□□ -1.61
CCNA1P78396 AC108032.1-201ENST00000416706 207 ntBASIC5□□□□□ -1.61
CCNA1P78396 AL356095.1-201ENST00000417217 199 ntBASIC5□□□□□ -1.61
CCNA1P78396 AL117339.2-201ENST00000430475 180 ntBASIC5□□□□□ -1.61
CCNA1P78396 MRPL50P1-201ENST00000431951 384 ntBASIC5□□□□□ -1.61
CCNA1P78396 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5□□□□□ -1.61
CCNA1P78396 AL357520.1-201ENST00000441557 453 ntBASIC5□□□□□ -1.61
CCNA1P78396 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5□□□□□ -1.61
CCNA1P78396 AC017007.3-201ENST00000479865 435 ntBASIC5□□□□□ -1.61
CCNA1P78396 RN7SL817P-201ENST00000480777 288 ntBASIC5□□□□□ -1.61
CCNA1P78396 AK4P6-201ENST00000505168 528 ntBASIC5□□□□□ -1.61
CCNA1P78396 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5□□□□□ -1.61
CCNA1P78396 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNA1P78396 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5□□□□□ -1.61
CCNA1P78396 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNA1P78396 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5□□□□□ -1.61
CCNA1P78396 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5□□□□□ -1.61
CCNA1P78396 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5□□□□□ -1.61
CCNA1P78396 CCDC58P3-201ENST00000590792 430 ntBASIC5□□□□□ -1.61
CCNA1P78396 AC005520.3-201ENST00000602874 370 ntBASIC5□□□□□ -1.61
CCNA1P78396 AC123786.2-201ENST00000603459 275 ntBASIC5□□□□□ -1.61
CCNA1P78396 AL161729.3-201ENST00000603533 673 ntBASIC5□□□□□ -1.61
CCNA1P78396 AC034236.3-201ENST00000605999 461 ntBASIC5□□□□□ -1.61
CCNA1P78396 AC008966.2-201ENST00000606157 453 ntBASIC5□□□□□ -1.61
CCNA1P78396 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5□□□□□ -1.61
CCNA1P78396 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCNA1P78396 AL021997.2-201ENST00000615674 271 ntBASIC5□□□□□ -1.61
CCNA1P78396 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCNA1P78396 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5□□□□□ -1.61
CCNA1P78396 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCNA1P78396 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5□□□□□ -1.61
CCNA1P78396 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
CCNA1P78396 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNA1P78396 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNA1P78396 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNA1P78396 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCNA1P78396 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCNA1P78396 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCNA1P78396 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNA1P78396 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCNA1P78396 MIR372-201ENST00000362225 67 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.99□□□□□ -1.61
CCNA1P78396 RPS20P14-201ENST00000412545 360 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNA1P78396 AC062016.2-201ENST00000420950 676 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 UBE2V2P1-201ENST00000434717 398 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNA1P78396 UBE2V1P3-201ENST00000439651 417 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNA1P78396 RPL5P32-201ENST00000454085 879 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 AP002812.1-201ENST00000495378 474 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 HMGB3P16-201ENST00000508037 287 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 PGBD4P4-201ENST00000509673 613 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms