Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.76□□□□□ -1.49
YBX1P67809 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.76□□□□□ -1.49
YBX1P67809 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
YBX1P67809 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.76□□□□□ -1.49
YBX1P67809 AC125494.2-201ENST00000602431 657 ntBASIC5.76□□□□□ -1.49
YBX1P67809 DUXAP4-201ENST00000603046 613 ntBASIC5.76□□□□□ -1.49
YBX1P67809 AC107214.2-201ENST00000608204 634 ntBASIC5.76□□□□□ -1.49
YBX1P67809 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.76□□□□□ -1.49
YBX1P67809 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
YBX1P67809 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.76□□□□□ -1.49
YBX1P67809 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.76□□□□□ -1.49
YBX1P67809 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
YBX1P67809 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
YBX1P67809 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
YBX1P67809 AC010401.2-201ENST00000575137 4934 ntBASIC5.76□□□□□ -1.49
YBX1P67809 MSL3P1-202ENST00000440028 1468 ntBASIC5.76□□□□□ -1.49
YBX1P67809 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
YBX1P67809 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
YBX1P67809 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
YBX1P67809 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
YBX1P67809 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 SNORA51.1-201ENST00000363243 140 ntBASIC5.75□□□□□ -1.49
YBX1P67809 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
YBX1P67809 RNU6-297P-201ENST00000384636 107 ntBASIC5.75□□□□□ -1.49
YBX1P67809 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
YBX1P67809 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
YBX1P67809 SNORA40.3-201ENST00000390964 122 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.75□□□□□ -1.49
YBX1P67809 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.75□□□□□ -1.49
YBX1P67809 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.75□□□□□ -1.49
YBX1P67809 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.75□□□□□ -1.49
YBX1P67809 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.75□□□□□ -1.49
YBX1P67809 AC073410.1-201ENST00000435125 589 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 DNAJC19P5-201ENST00000443295 316 ntBASIC5.75□□□□□ -1.49
YBX1P67809 RPS7P3-201ENST00000443360 580 ntBASIC5.75□□□□□ -1.49
YBX1P67809 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.75□□□□□ -1.49
YBX1P67809 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
YBX1P67809 VDAC2P4-201ENST00000452925 711 ntBASIC5.75□□□□□ -1.49
YBX1P67809 HLA-DPA3-207ENST00000454398 229 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.75□□□□□ -1.49
YBX1P67809 AC073522.1-201ENST00000483312 377 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC090013.1-201ENST00000485147 480 ntBASIC5.75□□□□□ -1.49
YBX1P67809 RPL23AP40-201ENST00000487630 390 ntBASIC5.75□□□□□ -1.49
YBX1P67809 TRBV5-2-201ENST00000489095 273 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC008629.2-201ENST00000503783 483 ntBASIC5.75□□□□□ -1.49
YBX1P67809 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.75□□□□□ -1.49
YBX1P67809 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 RNU6-358P-201ENST00000516564 75 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 TRIM77BP-201ENST00000524985 1119 ntBASIC5.75□□□□□ -1.49
YBX1P67809 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.75□□□□□ -1.49
YBX1P67809 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.75□□□□□ -1.49
YBX1P67809 AL133457.1-201ENST00000564251 987 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.75□□□□□ -1.49
YBX1P67809 SNORD39.2-201ENST00000579995 76 ntBASIC5.75□□□□□ -1.49
YBX1P67809 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.75□□□□□ -1.49
YBX1P67809 MIR4420-201ENST00000583944 77 ntBASIC5.75□□□□□ -1.49
YBX1P67809 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 AC011453.2-201ENST00000603737 729 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC008536.2-201ENST00000607284 349 ntBASIC5.75□□□□□ -1.49
YBX1P67809 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.75□□□□□ -1.49
YBX1P67809 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.75□□□□□ -1.49
YBX1P67809 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 MIR6863-201ENST00000636112 90 ntBASIC5.75□□□□□ -1.49
YBX1P67809 AC006026.1-201ENST00000444025 1803 ntBASIC5.75□□□□□ -1.49
YBX1P67809 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 MTCO1P6-201ENST00000481192 1384 ntBASIC5.75□□□□□ -1.49
YBX1P67809 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.75□□□□□ -1.49
YBX1P67809 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
YBX1P67809 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
YBX1P67809 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.75□□□□□ -1.49
YBX1P67809 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
YBX1P67809 GNL2P1-201ENST00000451274 2190 ntBASIC5.74□□□□□ -1.49
YBX1P67809 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
YBX1P67809 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms