Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.23□□□□□ -1.73
PKNOX1P55347 AC100847.1-201ENST00000611316 481 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 AP005019.3-201ENST00000620418 560 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 RPL23AP61-201ENST00000623642 466 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.23□□□□□ -1.73
PKNOX1P55347 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.23□□□□□ -1.73
PKNOX1P55347 FP325313.1-201ENST00000638228 703 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PKNOX1P55347 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PKNOX1P55347 HSPD1P11-201ENST00000508643 1702 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PKNOX1P55347 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PKNOX1P55347 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.23□□□□□ -1.73
PKNOX1P55347 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PKNOX1P55347 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PKNOX1P55347 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKNOX1P55347 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.22□□□□□ -1.73
PKNOX1P55347 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PKNOX1P55347 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.22□□□□□ -1.73
PKNOX1P55347 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKNOX1P55347 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKNOX1P55347 RNA5SP388-201ENST00000362584 119 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 MIR421-201ENST00000365696 85 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 SNORD66.1-201ENST00000391230 76 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 EIF1P3-201ENST00000423841 334 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.22□□□□□ -1.73
PKNOX1P55347 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.22□□□□□ -1.73
PKNOX1P55347 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKNOX1P55347 AC007563.3-201ENST00000433233 371 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 RSL24D1P2-201ENST00000445584 366 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.22□□□□□ -1.73
PKNOX1P55347 AC110749.1-201ENST00000462007 357 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.22□□□□□ -1.73
PKNOX1P55347 PCNAP1-201ENST00000505363 709 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 AC034244.2-201ENST00000514668 858 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 RNU6-491P-201ENST00000516099 110 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.22□□□□□ -1.73
PKNOX1P55347 AC090819.1-201ENST00000523800 1111 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.22□□□□□ -1.73
PKNOX1P55347 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.22□□□□□ -1.73
PKNOX1P55347 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.22□□□□□ -1.73
PKNOX1P55347 ELOCP28-201ENST00000590044 317 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PKNOX1P55347 AC073111.2-201ENST00000605657 1075 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 MIR432-201ENST00000606207 94 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 AC005021.1-201ENST00000608730 355 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PKNOX1P55347 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.22□□□□□ -1.73
PKNOX1P55347 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PKNOX1P55347 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.22□□□□□ -1.73
PKNOX1P55347 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PKNOX1P55347 AC090017.1-201ENST00000548612 1779 ntBASIC4.22□□□□□ -1.73
PKNOX1P55347 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKNOX1P55347 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
PKNOX1P55347 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PKNOX1P55347 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PKNOX1P55347 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PKNOX1P55347 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PKNOX1P55347 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PKNOX1P55347 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PKNOX1P55347 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKNOX1P55347 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKNOX1P55347 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKNOX1P55347 AC097504.1-201ENST00000515103 2415 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 RNU6-225P-201ENST00000384613 103 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PKNOX1P55347 AC093719.1-202ENST00000392735 373 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.21□□□□□ -1.74
PKNOX1P55347 SNRPFP1-201ENST00000414761 252 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AL512504.1-201ENST00000415494 778 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.21□□□□□ -1.74
PKNOX1P55347 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.21□□□□□ -1.74
PKNOX1P55347 AL161631.1-201ENST00000417933 486 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 RPL7AP25-201ENST00000423357 805 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.21□□□□□ -1.74
PKNOX1P55347 ELOCP8-201ENST00000439309 332 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 ELOCP15-201ENST00000442090 332 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AL354710.1-201ENST00000453641 246 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 DHFRP3-201ENST00000455595 559 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 RPL5P13-201ENST00000462840 709 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 CCDC75P1-201ENST00000469247 791 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AC083982.1-201ENST00000485679 344 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AC093270.2-201ENST00000486157 792 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 HMGB3P14-201ENST00000494195 599 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AC025554.1-201ENST00000505641 188 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.21□□□□□ -1.74
PKNOX1P55347 VWA8P1-201ENST00000510889 176 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.21□□□□□ -1.74
PKNOX1P55347 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.21□□□□□ -1.74
PKNOX1P55347 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.21□□□□□ -1.74
PKNOX1P55347 MIR4436B2-201ENST00000581415 91 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 MIR4270-201ENST00000581799 70 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 MIR4436B1-201ENST00000583272 91 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 OR1AB1P-201ENST00000585564 761 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.21□□□□□ -1.74
PKNOX1P55347 AC068790.7-201ENST00000602347 528 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AC084373.1-201ENST00000603311 235 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AC008782.1-201ENST00000603386 430 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 AC211433.2-201ENST00000608433 387 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 FAM25E-202ENST00000608562 189 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms