Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.87□□□□□ -1.63
HMGCS2P54868 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS2P54868 AL451086.1-201ENST00000605596 223 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 MIR7151-201ENST00000617477 60 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 AC039056.2-201ENST00000622261 511 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 MIR6500-201ENST00000622700 86 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
HMGCS2P54868 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS2P54868 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS2P54868 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HMGCS2P54868 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS2P54868 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HMGCS2P54868 CASC19-204ENST00000641001 2055 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS2P54868 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS2P54868 USP9YP4-201ENST00000424401 1745 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS2P54868 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS2P54868 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS2P54868 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS2P54868 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS2P54868 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGCS2P54868 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HMGCS2P54868 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS2P54868 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HMGCS2P54868 RNU6ATAC-201ENST00000408749 126 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGCS2P54868 AC098592.2-201ENST00000413158 265 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 RPL36AP10-201ENST00000421785 322 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 AC006946.1-201ENST00000429106 328 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGCS2P54868 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGCS2P54868 snoU13.22-201ENST00000459428 104 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 RPL23AP2-201ENST00000471227 466 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS2P54868 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGCS2P54868 RNU4-18P-201ENST00000516751 149 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 AC138832.1-201ENST00000522871 556 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.86□□□□□ -1.63
HMGCS2P54868 HSPE1P5-201ENST00000561489 272 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 AC027455.1-201ENST00000574104 594 ntBASIC4.86□□□□□ -1.63
HMGCS2P54868 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGCS2P54868 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS2P54868 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS2P54868 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGCS2P54868 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS2P54868 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HMGCS2P54868 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGCS2P54868 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HMGCS2P54868 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS2P54868 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HMGCS2P54868 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
HMGCS2P54868 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS2P54868 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCS2P54868 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HMGCS2P54868 RNU6-249P-201ENST00000363016 102 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS2P54868 AL078604.1-201ENST00000404609 466 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 TCEA1P4-201ENST00000415066 844 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS2P54868 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS2P54868 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS2P54868 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.85□□□□□ -1.63
HMGCS2P54868 AC108751.2-201ENST00000469993 231 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 GAPDHP36-201ENST00000480688 918 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS2P54868 AC104164.2-201ENST00000496953 495 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.85□□□□□ -1.63
HMGCS2P54868 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCS2P54868 RN7SKP34-201ENST00000516142 244 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS2P54868 AP000859.1-201ENST00000525536 307 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 DUX4L52-201ENST00000549363 777 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS2P54868 MIR5685-201ENST00000579080 79 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS2P54868 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGCS2P54868 OR51C1P-201ENST00000608504 942 ntBASIC4.85□□□□□ -1.63
HMGCS2P54868 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCS2P54868 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS2P54868 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.85□□□□□ -1.63
HMGCS2P54868 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCS2P54868 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HMGCS2P54868 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HMGCS2P54868 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
HMGCS2P54868 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCS2P54868 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCS2P54868 MAPK10-320ENST00000641462 6696 ntBASIC4.84□□□□□ -1.63
HMGCS2P54868 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HMGCS2P54868 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS2P54868 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGCS2P54868 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS2P54868 AC116667.1-201ENST00000604855 2072 ntBASIC4.84□□□□□ -1.63
HMGCS2P54868 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS2P54868 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCS2P54868 SNORA71.3-201ENST00000362582 128 ntBASIC4.84□□□□□ -1.63
HMGCS2P54868 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGCS2P54868 RNU6-729P-201ENST00000384399 107 ntBASIC4.84□□□□□ -1.63
HMGCS2P54868 RN7SKP167-201ENST00000411047 285 ntBASIC4.84□□□□□ -1.63
HMGCS2P54868 AC002524.1-201ENST00000411687 547 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms