Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
BRCC3P46736 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 RNA5SP175-201ENST00000364275 119 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 RNU6-1251P-201ENST00000364502 107 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 RPS27AP11-201ENST00000402798 447 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 USP9YP19-201ENST00000412165 485 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.63□□□□□ -1.67
BRCC3P46736 AC019070.1-201ENST00000415008 1024 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 FAM204CP-201ENST00000424489 642 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AL157831.1-201ENST00000426134 473 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AC114755.5-201ENST00000447760 831 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AC017099.1-201ENST00000448261 1028 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AL500527.1-201ENST00000448532 255 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.63□□□□□ -1.67
BRCC3P46736 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.63□□□□□ -1.67
BRCC3P46736 RPL7P22-201ENST00000466005 733 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
BRCC3P46736 ARL4AP1-201ENST00000503220 705 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.63□□□□□ -1.67
BRCC3P46736 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 RN7SKP46-201ENST00000515942 234 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AC104997.1-201ENST00000519761 717 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.63□□□□□ -1.67
BRCC3P46736 AC084824.1-201ENST00000550917 1005 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.63□□□□□ -1.67
BRCC3P46736 HMGB2P1-201ENST00000591146 634 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AC010201.1-201ENST00000605051 540 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AC096553.1-201ENST00000605169 829 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AL021997.2-201ENST00000615674 271 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AC007546.1-201ENST00000619452 559 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 AC007546.2-201ENST00000623996 360 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.63□□□□□ -1.67
BRCC3P46736 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.63□□□□□ -1.67
BRCC3P46736 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 CASC19-204ENST00000641001 2055 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.62□□□□□ -1.67
BRCC3P46736 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
BRCC3P46736 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 AC091046.3-201ENST00000631455 1574 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 RNA5SP307-201ENST00000362863 116 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 Y_RNA.126-201ENST00000363382 111 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 AC104297.1-201ENST00000393779 870 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 RNA5SP317-201ENST00000410176 116 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 RN7SKP235-201ENST00000410662 305 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 RNA5SP311-201ENST00000411290 116 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.62□□□□□ -1.67
BRCC3P46736 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.62□□□□□ -1.67
BRCC3P46736 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCC3P46736 MTCO1P57-201ENST00000432182 261 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 TMX2P1-201ENST00000436507 708 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCC3P46736 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.62□□□□□ -1.67
BRCC3P46736 RPL21P6-201ENST00000479171 504 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.62□□□□□ -1.67
BRCC3P46736 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.62□□□□□ -1.67
BRCC3P46736 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCC3P46736 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.62□□□□□ -1.67
BRCC3P46736 RNA5SP315-201ENST00000516340 116 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 RNA5SP312-201ENST00000517068 116 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCC3P46736 AC107918.3-201ENST00000533272 382 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCC3P46736 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.62□□□□□ -1.67
BRCC3P46736 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.62□□□□□ -1.67
BRCC3P46736 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 AL161729.3-201ENST00000603533 673 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 KATNBL1P1-201ENST00000605192 748 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 AC012467.1-201ENST00000607740 256 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 RMST_5.1-201ENST00000618704 126 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 AL133370.2-201ENST00000619934 439 ntBASIC4.62□□□□□ -1.67
BRCC3P46736 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCC3P46736 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.62□□□□□ -1.67
BRCC3P46736 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.62□□□□□ -1.67
BRCC3P46736 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
BRCC3P46736 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCC3P46736 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
BRCC3P46736 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
BRCC3P46736 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.61□□□□□ -1.67
BRCC3P46736 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCC3P46736 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRCC3P46736 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRCC3P46736 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
BRCC3P46736 RNU1-14P-201ENST00000362759 152 ntBASIC4.61□□□□□ -1.67
BRCC3P46736 RNU4-7P-201ENST00000364758 141 ntBASIC4.61□□□□□ -1.67
BRCC3P46736 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRCC3P46736 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms