Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-1P43699 AL031119.1-201ENST00000404707 1879 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 ZNF29P-201ENST00000225587 168 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NKX2-1P43699 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NKX2-1P43699 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NKX2-1P43699 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 AL603865.2-201ENST00000401679 213 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 MTCO2P31-201ENST00000402702 684 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AL592291.1-201ENST00000403830 352 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AL512430.2-201ENST00000406786 339 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 TAF13P2-201ENST00000416876 286 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.1□□□□□ -1.75
NKX2-1P43699 EIF4HP2-201ENST00000424380 563 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-1P43699 GTF2IP3-201ENST00000433887 494 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 RPS26P40-201ENST00000435209 294 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AC002504.1-201ENST00000438281 691 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AL138899.2-201ENST00000439139 499 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 RPS26P2-201ENST00000440331 348 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-1P43699 OTX2P1-201ENST00000450956 354 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC244505.3-201ENST00000454598 187 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AP000942.1-201ENST00000463969 747 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 RN7SL443P-201ENST00000464331 290 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 CCDC75P1-201ENST00000469247 791 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC093752.1-206ENST00000511823 336 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 SNORD116-26-201ENST00000516006 96 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 RNU6-311P-201ENST00000516224 102 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-1P43699 EEF1A1P37-201ENST00000522748 715 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 BLZF2P-201ENST00000553776 1130 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AC084757.1-201ENST00000559987 490 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NKX2-1P43699 RBM22P1-201ENST00000578589 1214 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 MIR4512-201ENST00000583257 77 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-1P43699 AL008729.2-201ENST00000606393 473 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AC000068.2-201ENST00000608816 460 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AL157392.4-201ENST00000609756 345 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 AC243756.2-201ENST00000618406 463 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC123767.1-202ENST00000620407 817 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 CU639417.4-201ENST00000623928 207 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-1P43699 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-1P43699 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NKX2-1P43699 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC083843.3-201ENST00000623679 2186 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NKX2-1P43699 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-1P43699 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NKX2-1P43699 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-1P43699 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NKX2-1P43699 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
NKX2-1P43699 SNORA73.1-201ENST00000363107 205 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
NKX2-1P43699 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 MIR16-1-201ENST00000385271 89 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AC119751.3-201ENST00000399720 670 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AL021331.1-201ENST00000402817 582 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AL512422.1-201ENST00000407033 553 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.09□□□□□ -1.75
NKX2-1P43699 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 QRSL1P2-201ENST00000418582 964 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 RPL12P28-201ENST00000430852 489 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AC023347.2-201ENST00000433994 462 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms