Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AP004289.2-201ENST00000444413 1457 ntBASIC6.97□□□□□ -1.29
TOP2AP11388 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
TOP2AP11388 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TOP2AP11388 AC245052.5-201ENST00000416320 649 ntBASIC6.97□□□□□ -1.29
TOP2AP11388 AC008280.1-201ENST00000418851 412 ntBASIC6.97□□□□□ -1.29
TOP2AP11388 AC092647.1-201ENST00000420654 287 ntBASIC6.97□□□□□ -1.29
TOP2AP11388 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC6.97□□□□□ -1.29
TOP2AP11388 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.97□□□□□ -1.29
TOP2AP11388 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
TOP2AP11388 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.97□□□□□ -1.29
TOP2AP11388 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.97□□□□□ -1.29
TOP2AP11388 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.97□□□□□ -1.29
TOP2AP11388 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.97□□□□□ -1.29
TOP2AP11388 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
TOP2AP11388 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
TOP2AP11388 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.97□□□□□ -1.29
TOP2AP11388 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.97□□□□□ -1.29
TOP2AP11388 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
TOP2AP11388 RNA5SP97-201ENST00000365006 84 ntBASIC6.96□□□□□ -1.29
TOP2AP11388 AC114814.2-201ENST00000419195 485 ntBASIC6.96□□□□□ -1.29
TOP2AP11388 AL159987.2-201ENST00000432754 307 ntBASIC6.96□□□□□ -1.29
TOP2AP11388 AC008155.2-201ENST00000464337 397 ntBASIC6.96□□□□□ -1.29
TOP2AP11388 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
TOP2AP11388 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
TOP2AP11388 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.96□□□□□ -1.29
TOP2AP11388 NPM1P47-201ENST00000560843 856 ntBASIC6.96□□□□□ -1.29
TOP2AP11388 AC005412.1-201ENST00000580812 1049 ntBASIC6.96□□□□□ -1.29
TOP2AP11388 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.96□□□□□ -1.29
TOP2AP11388 AL451044.1-201ENST00000604867 238 ntBASIC6.96□□□□□ -1.29
TOP2AP11388 SNORD91B-202ENST00000608459 222 ntBASIC6.96□□□□□ -1.29
TOP2AP11388 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.96□□□□□ -1.29
TOP2AP11388 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC6.96□□□□□ -1.29
TOP2AP11388 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TOP2AP11388 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
TOP2AP11388 A2MP1-204ENST00000566278 4130 ntBASIC6.96□□□□□ -1.3
TOP2AP11388 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TOP2AP11388 AC067945.1-201ENST00000342609 618 ntBASIC6.96□□□□□ -1.3
TOP2AP11388 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.96□□□□□ -1.3
TOP2AP11388 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.96□□□□□ -1.3
TOP2AP11388 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.96□□□□□ -1.3
TOP2AP11388 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TOP2AP11388 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.96□□□□□ -1.3
TOP2AP11388 SLC25A36P1-201ENST00000590111 465 ntBASIC6.96□□□□□ -1.3
TOP2AP11388 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.96□□□□□ -1.3
TOP2AP11388 AL391497.1-201ENST00000608671 547 ntBASIC6.96□□□□□ -1.3
TOP2AP11388 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.96□□□□□ -1.3
TOP2AP11388 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.95□□□□□ -1.3
TOP2AP11388 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TOP2AP11388 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
TOP2AP11388 AL591419.1-201ENST00000427423 339 ntBASIC6.95□□□□□ -1.3
TOP2AP11388 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC6.95□□□□□ -1.3
TOP2AP11388 RPL23AP89-201ENST00000439324 255 ntBASIC6.95□□□□□ -1.3
TOP2AP11388 NPM1P28-201ENST00000492269 840 ntBASIC6.95□□□□□ -1.3
TOP2AP11388 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.95□□□□□ -1.3
TOP2AP11388 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.95□□□□□ -1.3
TOP2AP11388 AC079171.1-201ENST00000568788 914 ntBASIC6.95□□□□□ -1.3
TOP2AP11388 MIR3200-201ENST00000580767 85 ntBASIC6.95□□□□□ -1.3
TOP2AP11388 AC005972.3-201ENST00000606304 481 ntBASIC6.95□□□□□ -1.3
TOP2AP11388 RNU1-30P-201ENST00000606575 163 ntBASIC6.95□□□□□ -1.3
TOP2AP11388 AC058791.1-201ENST00000608412 3198 ntBASIC6.94□□□□□ -1.3
TOP2AP11388 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.94□□□□□ -1.3
TOP2AP11388 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP2AP11388 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.94□□□□□ -1.3
TOP2AP11388 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
TOP2AP11388 KRR1P1-201ENST00000419430 803 ntBASIC6.94□□□□□ -1.3
TOP2AP11388 RPS26P28-201ENST00000470806 348 ntBASIC6.94□□□□□ -1.3
TOP2AP11388 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.94□□□□□ -1.3
TOP2AP11388 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC6.94□□□□□ -1.3
TOP2AP11388 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.94□□□□□ -1.3
TOP2AP11388 MIR4472-2-201ENST00000582069 67 ntBASIC6.94□□□□□ -1.3
TOP2AP11388 AC090246.1-201ENST00000616499 426 ntBASIC6.94□□□□□ -1.3
TOP2AP11388 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TOP2AP11388 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TOP2AP11388 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP2AP11388 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP2AP11388 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP2AP11388 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP2AP11388 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOP2AP11388 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.93□□□□□ -1.3
TOP2AP11388 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TOP2AP11388 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOP2AP11388 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
TOP2AP11388 SNORD35B-201ENST00000363660 87 ntBASIC6.93□□□□□ -1.3
TOP2AP11388 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOP2AP11388 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.93□□□□□ -1.3
TOP2AP11388 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.93□□□□□ -1.3
TOP2AP11388 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.93□□□□□ -1.3
TOP2AP11388 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.93□□□□□ -1.3
TOP2AP11388 PDSS1P2-201ENST00000449397 678 ntBASIC6.93□□□□□ -1.3
TOP2AP11388 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.93□□□□□ -1.3
TOP2AP11388 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.93□□□□□ -1.3
TOP2AP11388 AC104619.4-201ENST00000510773 249 ntBASIC6.93□□□□□ -1.3
TOP2AP11388 AC008694.2-201ENST00000517591 306 ntBASIC6.93□□□□□ -1.3
TOP2AP11388 MIR5187-201ENST00000583479 76 ntBASIC6.93□□□□□ -1.3
TOP2AP11388 U3.45-201ENST00000607547 219 ntBASIC6.93□□□□□ -1.3
TOP2AP11388 AC023509.5-201ENST00000617434 807 ntBASIC6.93□□□□□ -1.3
TOP2AP11388 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.93□□□□□ -1.3
TOP2AP11388 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.93□□□□□ -1.3
TOP2AP11388 GVINP1-202ENST00000531871 7271 ntBASIC6.93□□□□□ -1.3
TOP2AP11388 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms