Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.27□□□□□ -1.57
PHGDHO43175 OR8B1P-202ENST00000641132 1178 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PHGDHO43175 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 USP9YP4-201ENST00000424401 1745 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.26□□□□□ -1.57
PHGDHO43175 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.26□□□□□ -1.57
PHGDHO43175 OR9K1P-201ENST00000326513 941 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.26□□□□□ -1.57
PHGDHO43175 RNU6-1066P-201ENST00000363573 105 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 MIR589-201ENST00000385238 99 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AL139098.1-201ENST00000407291 389 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 RNU2-42P-201ENST00000410697 113 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 COX5BP7-201ENST00000414780 274 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.26□□□□□ -1.57
PHGDHO43175 MTCYBP34-201ENST00000439552 670 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 CYCSP51-201ENST00000443545 318 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC073109.1-201ENST00000445066 978 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AL034418.1-201ENST00000448675 860 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC104634.1-201ENST00000452720 462 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC007998.1-201ENST00000474156 672 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 RPL7P18-201ENST00000478965 734 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC022133.1-201ENST00000490961 571 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC069304.1-201ENST00000491593 704 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AL049874.2-201ENST00000492636 288 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 NIFKP7-201ENST00000503365 834 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 AC021146.8-201ENST00000507455 733 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC117522.2-201ENST00000510049 657 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC079395.1-201ENST00000510981 262 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 RPL7L1P13-201ENST00000511702 739 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 AC100784.1-201ENST00000522790 310 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.26□□□□□ -1.57
PHGDHO43175 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PHGDHO43175 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC004825.1-201ENST00000555068 586 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC022884.2-201ENST00000578535 580 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC005252.1-201ENST00000604518 1063 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC000068.2-201ENST00000608816 460 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC131235.4-201ENST00000609288 620 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.26□□□□□ -1.57
PHGDHO43175 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.26□□□□□ -1.57
PHGDHO43175 AC116618.1-201ENST00000634617 774 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AP003399.1-201ENST00000637534 361 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 AC103706.2-201ENST00000638080 240 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 AL138820.1-201ENST00000617901 5305 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PHGDHO43175 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PHGDHO43175 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
PHGDHO43175 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHGDHO43175 AC005539.1-201ENST00000443768 1479 ntBASIC5.26□□□□□ -1.57
PHGDHO43175 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.26□□□□□ -1.57
PHGDHO43175 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PHGDHO43175 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.25□□□□□ -1.57
PHGDHO43175 SGO1P2-201ENST00000429458 1589 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PHGDHO43175 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PHGDHO43175 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PHGDHO43175 AC004817.4-201ENST00000602396 3625 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.25□□□□□ -1.57
PHGDHO43175 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.25□□□□□ -1.57
PHGDHO43175 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PHGDHO43175 RNU6-582P-201ENST00000362989 107 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms