Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC073136.1-201ENST00000449426 2884 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH17O14917 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH17O14917 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH17O14917 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH17O14917 AC093719.1-202ENST00000392735 373 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 MTND4P13-201ENST00000402078 1023 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDH17O14917 RNU2-65P-201ENST00000410162 185 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 RPL6P29-201ENST00000414863 865 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 RPL7AP49-201ENST00000429522 581 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 MOB1AP1-201ENST00000430903 535 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 RPS6P15-201ENST00000431996 751 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AL591438.1-201ENST00000433508 581 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 OR52B5P-201ENST00000435337 951 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH17O14917 GTF2IP7-202ENST00000436677 309 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH17O14917 PPIAP17-201ENST00000438507 471 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 TXNP5-201ENST00000441043 315 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 FAR2P1-206ENST00000449736 709 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AL591363.1-201ENST00000450091 483 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH17O14917 AURKAPS1-201ENST00000451805 1212 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH17O14917 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDH17O14917 AC109464.1-201ENST00000511091 819 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDH17O14917 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH17O14917 HMGN1P9-201ENST00000515212 298 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 SCARNA20.4-201ENST00000516969 131 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH17O14917 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDH17O14917 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH17O14917 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDH17O14917 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH17O14917 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH17O14917 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDH17O14917 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH17O14917 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH17O14917 AC123786.2-201ENST00000603459 275 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 DUXAP3-201ENST00000603616 594 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AL445222.1-201ENST00000607259 628 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AP004247.3-201ENST00000608682 624 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AC092106.3-201ENST00000611308 722 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AC234782.5-201ENST00000617723 324 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH17O14917 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDH17O14917 OR52B5P-202ENST00000641118 1110 ntBASIC5.06□□□□□ -1.6
PCDH17O14917 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH17O14917 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDH17O14917 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDH17O14917 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH17O14917 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH17O14917 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDH17O14917 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDH17O14917 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH17O14917 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH17O14917 ADAM5-202ENST00000399789 1942 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH17O14917 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDH17O14917 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH17O14917 U8.4-201ENST00000363626 134 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 MIR765-201ENST00000390226 114 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDH17O14917 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDH17O14917 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDH17O14917 NPM1P24-201ENST00000428039 894 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 AC005033.1-201ENST00000428904 813 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PCDH17O14917 RPL12P3-201ENST00000440080 396 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 MTATP6P26-201ENST00000445926 662 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 AC090804.1-201ENST00000448870 490 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 OR52E3P-201ENST00000452083 936 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDH17O14917 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDH17O14917 RPSAP50-201ENST00000481955 852 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 VPS26AP1-201ENST00000483197 979 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 RN7SL808P-201ENST00000496066 299 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDH17O14917 AC022360.1-201ENST00000521058 340 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDH17O14917 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH17O14917 OR8G3P-201ENST00000533406 921 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH17O14917 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH17O14917 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDH17O14917 AL442163.2-201ENST00000553912 710 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDH17O14917 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDH17O14917 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDH17O14917 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDH17O14917 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDH17O14917 AC069307.1-201ENST00000602820 447 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 AC021171.1-201ENST00000603137 706 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 AC005252.1-201ENST00000604518 1063 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 AC092954.1-201ENST00000609121 445 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 AC126915.2-201ENST00000610957 190 ntBASIC5.05□□□□□ -1.6
PCDH17O14917 AL121890.2-201ENST00000617644 465 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms