Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AL445183.3-201ENST00000414168 502 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 CKS1BP6-201ENST00000424932 240 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 RPL23AP4-201ENST00000427757 463 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AC006994.1-201ENST00000438212 839 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 RHEBP2-201ENST00000450289 600 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AL935212.3-201ENST00000450729 284 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AL672167.3-201ENST00000465951 960 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AC133963.2-201ENST00000513686 578 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 RNA5SP249-201ENST00000516127 99 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 RNA5SP230-201ENST00000517039 122 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AC016597.2-201ENST00000613256 341 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AC022960.3-201ENST00000619794 441 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AC011944.2-201ENST00000624440 683 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 TMEM30CP-203ENST00000637814 1035 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AL391684.1-202ENST00000641293 1636 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 AC007342.7-201ENST00000624610 2337 ntBASIC4.81□□□□□ -1.64
YIPF1Q9Y548 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
YIPF1Q9Y548 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 VN2R3P-201ENST00000422626 1412 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 CASC19-261ENST00000641853 1638 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 RNU6-481P-201ENST00000384194 107 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 RNU6-729P-201ENST00000384399 107 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 HMGB1P10-201ENST00000395823 563 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 ATF1P1-201ENST00000406040 927 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AC010385.1-201ENST00000412374 256 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 TMSB10P2-201ENST00000416049 131 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AL121878.1-201ENST00000418638 859 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AC013262.1-201ENST00000426710 252 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 RPS12P10-201ENST00000427031 377 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 NPM1P33-201ENST00000438918 872 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 RPS27P5-201ENST00000444247 244 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 ISCUP1-201ENST00000454451 448 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 PSMC1P13-201ENST00000458195 985 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AC138701.1-201ENST00000524329 714 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AP000827.1-201ENST00000527814 258 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AC104229.1-201ENST00000561364 255 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 MIR4675-201ENST00000577898 77 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 SS18L2P2-201ENST00000583960 235 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AC020910.2-201ENST00000603635 610 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AC034236.3-201ENST00000605999 461 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AL122125.1-201ENST00000616999 600 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AL356274.1-201ENST00000617064 410 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 AL445984.1-201ENST00000637834 659 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 MTND5P11-201ENST00000511037 1812 ntBASIC4.8□□□□□ -1.64
YIPF1Q9Y548 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YIPF1Q9Y548 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms