Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AL672167.1-203ENST00000641299 2975 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 RAD17P1-201ENST00000418130 2042 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AL133268.1-201ENST00000405676 1401 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 OR56B2P-202ENST00000641377 2453 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 ZNF90P1-201ENST00000480493 1951 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RNU6-252P-201ENST00000363232 107 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RNU1-32P-201ENST00000363937 159 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RNA5SP151-201ENST00000365632 117 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 OR13C3-201ENST00000374781 1108 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RNU6-481P-201ENST00000384194 107 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 TATDN1P1-201ENST00000414123 891 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AL158825.1-201ENST00000414735 521 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AL807761.1-201ENST00000417622 171 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RPL7AP25-201ENST00000423357 805 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 CENPIP1-201ENST00000425713 902 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AL162591.2-201ENST00000449634 317 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 DUXAP8-207ENST00000456786 622 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC092691.2-201ENST00000461787 803 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RPL21P18-201ENST00000469899 480 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC108751.2-201ENST00000469993 231 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RPL23AP37-201ENST00000479658 549 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 HMGB1P38-201ENST00000490557 577 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RN7SKP34-201ENST00000516142 244 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC021451.1-201ENST00000523498 1129 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 OR8G5-201ENST00000524943 1041 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AP001804.2-201ENST00000533932 910 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RNF138P2-201ENST00000603490 592 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC112220.2-201ENST00000605513 533 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 DUXAP10-204ENST00000612052 616 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AL512427.1-201ENST00000618593 349 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC015871.5-202ENST00000623252 701 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AC097655.1-201ENST00000635075 318 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 OR2L1P-202ENST00000641567 1023 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 AL137100.1-201ENST00000556703 1620 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 CPHL1P-201ENST00000461341 3407 ntBASIC4.89□□□□□ -1.63
SIX4Q9UIU6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX4Q9UIU6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 SMG1P4-204ENST00000523028 4131 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 RNU6-31P-201ENST00000384388 108 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 SDHCP2-201ENST00000398565 501 ntBASIC4.88□□□□□ -1.63
SIX4Q9UIU6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX4Q9UIU6 AC096533.1-201ENST00000411645 353 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms