Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AL022311.1-201ENST00000623726 19416 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 RNA5SP88-201ENST00000365560 109 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AL589647.1-201ENST00000402485 466 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 RPS29P14-201ENST00000431518 171 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC096775.1-201ENST00000437724 448 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 RAB11AP1-201ENST00000442978 646 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC073109.1-201ENST00000445066 978 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 SNRPGP9-201ENST00000456025 225 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 CFTRP1-201ENST00000456646 183 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC093166.4-201ENST00000457867 318 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC007998.1-201ENST00000474156 672 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 UBA52P3-201ENST00000491303 382 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 TOMM22P4-201ENST00000511318 336 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 RNA5SP216-201ENST00000516111 123 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 RNY4P37-201ENST00000516225 96 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 SNORA70.20-201ENST00000516848 126 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 RN7SKP96-201ENST00000516948 297 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC008802.1-201ENST00000519121 791 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC018552.1-201ENST00000562099 811 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 ZNF415P1-201ENST00000582279 1166 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC020914.6-201ENST00000594327 272 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC006115.2-201ENST00000596823 202 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC079089.3-201ENST00000603094 673 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 PSMA6P4-201ENST00000603247 718 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC069304.2-201ENST00000605154 435 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC087752.4-201ENST00000605911 462 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC079228.1-201ENST00000624774 1049 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 TCP11X1-202ENST00000622971 1372 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 AL355834.1-201ENST00000556602 3965 ntBASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM39Q9HCM9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AL022393.1-201ENST00000625142 1677 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AL359955.1-201ENST00000455242 3275 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 MIR133A2-201ENST00000347538 102 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 MIR375-201ENST00000362103 64 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 RNU4-91P-201ENST00000364778 135 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 PEX12P1-201ENST00000400284 1048 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 MTCO3P31-201ENST00000405526 789 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 SNORA11.3-201ENST00000408471 128 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 MTCYBP38-201ENST00000417160 1123 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 TMBIM7P-201ENST00000418074 855 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 PRELID3BP10-201ENST00000431957 584 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 MTND4P6-201ENST00000438297 472 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 RPL18AP17-201ENST00000455326 198 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC013828.1-201ENST00000481845 158 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 NENFP3-201ENST00000503735 313 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 CBX3P3-201ENST00000508108 532 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC010625.1-201ENST00000511296 403 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AP000859.1-201ENST00000525536 307 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC090424.1-201ENST00000535243 736 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AL121594.2-201ENST00000541658 472 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC016839.1-201ENST00000578162 867 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC068276.1-201ENST00000605793 379 ntBASIC5.75□□□□□ -1.49
TRIM39Q9HCM9 AC024560.3-201ENST00000608482 349 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms