Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 HSPE1P27-201ENST00000430808 296 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 ARAFP2-201ENST00000440565 559 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 RPS7P7-201ENST00000463499 571 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 RPL23AP2-201ENST00000471227 466 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 IPO5P1-202ENST00000600039 287 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 MIR8059-201ENST00000620427 81 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 AC112484.5-201ENST00000624189 228 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 OR51C1P-202ENST00000641159 1444 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 RNA5SP388-201ENST00000362584 119 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 MT-RNR1-201ENST00000389680 954 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 CYCSP10-201ENST00000417973 294 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 RPL36AP36-201ENST00000418616 301 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 EIF2S2P5-201ENST00000457635 968 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 RPS20P4-201ENST00000461659 355 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 TVP23BP1-201ENST00000557500 617 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC008638.3-201ENST00000603341 463 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 RNU1-64P-201ENST00000365443 163 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 SNORD66.1-201ENST00000391230 76 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AL356968.2-201ENST00000412769 1257 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AL161631.1-201ENST00000417933 486 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AL389915.1-201ENST00000422463 466 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 EIF1P3-201ENST00000423841 334 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 RPS11P1-201ENST00000451072 473 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC108022.1-201ENST00000493466 478 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 MED28P5-201ENST00000528254 438 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC022882.1-201ENST00000532142 501 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 AL161729.3-201ENST00000603533 673 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 MIR3653-201ENST00000625572 110 ntBASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KIAA1549Q9HCM3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 OR11H4-201ENST00000315409 1082 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 HMGB3P19-201ENST00000403971 560 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 AL445189.1-201ENST00000405722 338 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 RPS17P13-201ENST00000448974 407 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 AC011270.1-201ENST00000558606 583 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 ZYXP1-201ENST00000617638 118 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 TMEM30CP-203ENST00000637814 1035 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 DDX18P4-201ENST00000511690 1966 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 RLIMP1-201ENST00000339626 1680 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms